Gene : Medtr0495s0020 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11403 - CYTOCHROME C OXIDASE SUBUNIT III Description:  cytochrome C oxidase subunit 3
Genomic Order:  2 Name:  ? Medtr0495s0020
Secondary Identifier:  ? PAC:31084685
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-3781 Medicago truncatula pathologic  
Mtruncatula PWY-7279 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0495s0020 0.5kb upstream 0.5kb upstream 875 true scaffold0495: 2134-3008 Medicago truncatula
Medtr0495s0020 0.5kb upstream 0.5kb upstream 500 false scaffold0495: 2134-2633 Medicago truncatula
Medtr0495s0020 0.5kb downstream 0.5kb downstream 875 true scaffold0495: 2634-3508 Medicago truncatula
Medtr0495s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0495: 3009-3508 Medicago truncatula
Medtr0495s0020 1.0kb upstream 1.0kb upstream 1375 true scaffold0495: 1634-3008 Medicago truncatula
Medtr0495s0020 1.0kb upstream 1.0kb upstream 1000 false scaffold0495: 1634-2633 Medicago truncatula
Medtr0495s0020 1.0kb downstream 1.0kb downstream 1375 true scaffold0495: 2634-4008 Medicago truncatula
Medtr0495s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0495: 3009-4008 Medicago truncatula
Medtr0495s0020 2.0kb upstream 2.0kb upstream 2375 true scaffold0495: 634-3008 Medicago truncatula
Medtr0495s0020 2.0kb upstream 2.0kb upstream 2000 false scaffold0495: 634-2633 Medicago truncatula
Medtr0495s0020 2.0kb downstream 2.0kb downstream 2375 true scaffold0495: 2634-5008 Medicago truncatula
Medtr0495s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0495: 3009-5008 Medicago truncatula
Medtr0495s0020 5.0kb upstream 5.0kb upstream 3008 true scaffold0495: 1-3008 Medicago truncatula
Medtr0495s0020 5.0kb upstream 5.0kb upstream 2633 false scaffold0495: 1-2633 Medicago truncatula
Medtr0495s0020 5.0kb downstream 5.0kb downstream 5375 true scaffold0495: 2634-8008 Medicago truncatula
Medtr0495s0020 5.0kb downstream 5.0kb downstream 5000 false scaffold0495: 3009-8008 Medicago truncatula
Medtr0495s0020 10.0kb upstream 10.0kb upstream 3008 true scaffold0495: 1-3008 Medicago truncatula
Medtr0495s0020 10.0kb upstream 10.0kb upstream 2633 false scaffold0495: 1-2633 Medicago truncatula
Medtr0495s0020 10.0kb downstream 10.0kb downstream 10189 true scaffold0495: 2634-12822 Medicago truncatula
Medtr0495s0020 10.0kb downstream 10.0kb downstream 9814 false scaffold0495: 3009-12822 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657382 5273 Angiosperm View MSA
122288362 5265 Fabidae View MSA
124039121 5270 Rosid View MSA
123611155 5271 Pentapetalae View MSA
122645730 5272 Eudicot View MSA
120929424 5274 Embryophyte View MSA
122969985 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain