Gene : Medtr0448s0010 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF01051 - Initiator Replication protein (Rep_3) Description:  replication initiation protein RepB
Genomic Order:  1 Name:  ? Medtr0448s0010
Secondary Identifier:  ? PAC:31061953
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0448s0010 0.5kb upstream 0.5kb upstream 1373 true scaffold0448: 1114-2486 Medicago truncatula
Medtr0448s0010 0.5kb upstream 0.5kb upstream 500 false scaffold0448: 1987-2486 Medicago truncatula
Medtr0448s0010 0.5kb downstream 0.5kb downstream 1373 true scaffold0448: 614-1986 Medicago truncatula
Medtr0448s0010 0.5kb downstream 0.5kb downstream 500 false scaffold0448: 614-1113 Medicago truncatula
Medtr0448s0010 1.0kb upstream 1.0kb upstream 1873 true scaffold0448: 1114-2986 Medicago truncatula
Medtr0448s0010 1.0kb upstream 1.0kb upstream 1000 false scaffold0448: 1987-2986 Medicago truncatula
Medtr0448s0010 1.0kb downstream 1.0kb downstream 1873 true scaffold0448: 114-1986 Medicago truncatula
Medtr0448s0010 1.0kb downstream 1.0kb downstream 1000 false scaffold0448: 114-1113 Medicago truncatula
Medtr0448s0010 2.0kb upstream 2.0kb upstream 2873 true scaffold0448: 1114-3986 Medicago truncatula
Medtr0448s0010 2.0kb upstream 2.0kb upstream 2000 false scaffold0448: 1987-3986 Medicago truncatula
Medtr0448s0010 2.0kb downstream 2.0kb downstream 1986 true scaffold0448: 1-1986 Medicago truncatula
Medtr0448s0010 2.0kb downstream 2.0kb downstream 1113 false scaffold0448: 1-1113 Medicago truncatula
Medtr0448s0010 5.0kb upstream 5.0kb upstream 5873 true scaffold0448: 1114-6986 Medicago truncatula
Medtr0448s0010 5.0kb upstream 5.0kb upstream 5000 false scaffold0448: 1987-6986 Medicago truncatula
Medtr0448s0010 5.0kb downstream 5.0kb downstream 1986 true scaffold0448: 1-1986 Medicago truncatula
Medtr0448s0010 5.0kb downstream 5.0kb downstream 1113 false scaffold0448: 1-1113 Medicago truncatula
Medtr0448s0010 10.0kb upstream 10.0kb upstream 10873 true scaffold0448: 1114-11986 Medicago truncatula
Medtr0448s0010 10.0kb upstream 10.0kb upstream 10000 false scaffold0448: 1987-11986 Medicago truncatula
Medtr0448s0010 10.0kb downstream 10.0kb downstream 1986 true scaffold0448: 1-1986 Medicago truncatula
Medtr0448s0010 10.0kb downstream 10.0kb downstream 1113 false scaffold0448: 1-1113 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632080 5273 Angiosperm Singleton cluster - no MSA
122270753 5265 Fabidae Singleton cluster - no MSA
124011435 5270 Rosid Singleton cluster - no MSA
123585335 5271 Pentapetalae Singleton cluster - no MSA
122620033 5272 Eudicot Singleton cluster - no MSA
120904184 5274 Embryophyte Singleton cluster - no MSA
122944839 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain