Gene : Medtr0616s0050 M. truncatula Mt4.0v1
Defline:  (1 of 5) PF05488 - PAAR motif (PAAR_motif) Description:  PAAR motif protein
Genomic Order:  4 Name:  ? Medtr0616s0050
Secondary Identifier:  ? PAC:31105988
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0616s0050 0.5kb upstream 0.5kb upstream 2194 true scaffold0616: 7187-9380 Medicago truncatula
Medtr0616s0050 0.5kb upstream 0.5kb upstream 500 false scaffold0616: 7187-7686 Medicago truncatula
Medtr0616s0050 0.5kb downstream 0.5kb downstream 1868 true scaffold0616: 7687-9554 Medicago truncatula
Medtr0616s0050 0.5kb downstream 0.5kb downstream 174 false scaffold0616: 9381-9554 Medicago truncatula
Medtr0616s0050 1.0kb upstream 1.0kb upstream 2694 true scaffold0616: 6687-9380 Medicago truncatula
Medtr0616s0050 1.0kb upstream 1.0kb upstream 1000 false scaffold0616: 6687-7686 Medicago truncatula
Medtr0616s0050 1.0kb downstream 1.0kb downstream 1868 true scaffold0616: 7687-9554 Medicago truncatula
Medtr0616s0050 1.0kb downstream 1.0kb downstream 174 false scaffold0616: 9381-9554 Medicago truncatula
Medtr0616s0050 2.0kb upstream 2.0kb upstream 3694 true scaffold0616: 5687-9380 Medicago truncatula
Medtr0616s0050 2.0kb upstream 2.0kb upstream 2000 false scaffold0616: 5687-7686 Medicago truncatula
Medtr0616s0050 2.0kb downstream 2.0kb downstream 1868 true scaffold0616: 7687-9554 Medicago truncatula
Medtr0616s0050 2.0kb downstream 2.0kb downstream 174 false scaffold0616: 9381-9554 Medicago truncatula
Medtr0616s0050 5.0kb upstream 5.0kb upstream 6694 true scaffold0616: 2687-9380 Medicago truncatula
Medtr0616s0050 5.0kb upstream 5.0kb upstream 5000 false scaffold0616: 2687-7686 Medicago truncatula
Medtr0616s0050 5.0kb downstream 5.0kb downstream 1868 true scaffold0616: 7687-9554 Medicago truncatula
Medtr0616s0050 5.0kb downstream 5.0kb downstream 174 false scaffold0616: 9381-9554 Medicago truncatula
Medtr0616s0050 10.0kb upstream 10.0kb upstream 9380 true scaffold0616: 1-9380 Medicago truncatula
Medtr0616s0050 10.0kb upstream 10.0kb upstream 7686 false scaffold0616: 1-7686 Medicago truncatula
Medtr0616s0050 10.0kb downstream 10.0kb downstream 1868 true scaffold0616: 7687-9554 Medicago truncatula
Medtr0616s0050 10.0kb downstream 10.0kb downstream 174 false scaffold0616: 9381-9554 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632138 5273 Angiosperm Singleton cluster - no MSA
122270818 5265 Fabidae Singleton cluster - no MSA
124011494 5270 Rosid Singleton cluster - no MSA
123585394 5271 Pentapetalae Singleton cluster - no MSA
122620091 5272 Eudicot Singleton cluster - no MSA
120904242 5274 Embryophyte Singleton cluster - no MSA
122944897 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain