Gene : Medtr0607s0040 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  1
Name:  ? Medtr0607s0040 Secondary Identifier:  ? PAC:31092038
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0607s0040 0.5kb upstream 0.5kb upstream 1455 true scaffold0607: 3779-5233 Medicago truncatula
Medtr0607s0040 0.5kb upstream 0.5kb upstream 500 false scaffold0607: 3779-4278 Medicago truncatula
Medtr0607s0040 0.5kb downstream 0.5kb downstream 1455 true scaffold0607: 4279-5733 Medicago truncatula
Medtr0607s0040 0.5kb downstream 0.5kb downstream 500 false scaffold0607: 5234-5733 Medicago truncatula
Medtr0607s0040 1.0kb upstream 1.0kb upstream 1955 true scaffold0607: 3279-5233 Medicago truncatula
Medtr0607s0040 1.0kb upstream 1.0kb upstream 1000 false scaffold0607: 3279-4278 Medicago truncatula
Medtr0607s0040 1.0kb downstream 1.0kb downstream 1955 true scaffold0607: 4279-6233 Medicago truncatula
Medtr0607s0040 1.0kb downstream 1.0kb downstream 1000 false scaffold0607: 5234-6233 Medicago truncatula
Medtr0607s0040 2.0kb upstream 2.0kb upstream 2955 true scaffold0607: 2279-5233 Medicago truncatula
Medtr0607s0040 2.0kb upstream 2.0kb upstream 2000 false scaffold0607: 2279-4278 Medicago truncatula
Medtr0607s0040 2.0kb downstream 2.0kb downstream 2955 true scaffold0607: 4279-7233 Medicago truncatula
Medtr0607s0040 2.0kb downstream 2.0kb downstream 2000 false scaffold0607: 5234-7233 Medicago truncatula
Medtr0607s0040 5.0kb upstream 5.0kb upstream 5233 true scaffold0607: 1-5233 Medicago truncatula
Medtr0607s0040 5.0kb upstream 5.0kb upstream 4278 false scaffold0607: 1-4278 Medicago truncatula
Medtr0607s0040 5.0kb downstream 5.0kb downstream 5524 true scaffold0607: 4279-9802 Medicago truncatula
Medtr0607s0040 5.0kb downstream 5.0kb downstream 4569 false scaffold0607: 5234-9802 Medicago truncatula
Medtr0607s0040 10.0kb upstream 10.0kb upstream 5233 true scaffold0607: 1-5233 Medicago truncatula
Medtr0607s0040 10.0kb upstream 10.0kb upstream 4278 false scaffold0607: 1-4278 Medicago truncatula
Medtr0607s0040 10.0kb downstream 10.0kb downstream 5524 true scaffold0607: 4279-9802 Medicago truncatula
Medtr0607s0040 10.0kb downstream 10.0kb downstream 4569 false scaffold0607: 5234-9802 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632136 5273 Angiosperm Singleton cluster - no MSA
122270815 5265 Fabidae Singleton cluster - no MSA
124011492 5270 Rosid Singleton cluster - no MSA
123585392 5271 Pentapetalae Singleton cluster - no MSA
122620089 5272 Eudicot Singleton cluster - no MSA
120904240 5274 Embryophyte Singleton cluster - no MSA
122944895 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain