Gene : Medtr0728s0020 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR14493:SF47 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 Description:  ARM repeat CCCH-type zinc finger protein
Genomic Order:  1 Name:  ? Medtr0728s0020
Secondary Identifier:  ? PAC:31100948
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0728s0020 0.5kb upstream 0.5kb upstream 2486 true scaffold0728: 3345-5830 Medicago truncatula
Medtr0728s0020 0.5kb upstream 0.5kb upstream 500 false scaffold0728: 3345-3844 Medicago truncatula
Medtr0728s0020 0.5kb downstream 0.5kb downstream 2486 true scaffold0728: 3845-6330 Medicago truncatula
Medtr0728s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0728: 5831-6330 Medicago truncatula
Medtr0728s0020 1.0kb upstream 1.0kb upstream 2986 true scaffold0728: 2845-5830 Medicago truncatula
Medtr0728s0020 1.0kb upstream 1.0kb upstream 1000 false scaffold0728: 2845-3844 Medicago truncatula
Medtr0728s0020 1.0kb downstream 1.0kb downstream 2986 true scaffold0728: 3845-6830 Medicago truncatula
Medtr0728s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0728: 5831-6830 Medicago truncatula
Medtr0728s0020 2.0kb upstream 2.0kb upstream 3986 true scaffold0728: 1845-5830 Medicago truncatula
Medtr0728s0020 2.0kb upstream 2.0kb upstream 2000 false scaffold0728: 1845-3844 Medicago truncatula
Medtr0728s0020 2.0kb downstream 2.0kb downstream 3489 true scaffold0728: 3845-7333 Medicago truncatula
Medtr0728s0020 2.0kb downstream 2.0kb downstream 1503 false scaffold0728: 5831-7333 Medicago truncatula
Medtr0728s0020 5.0kb upstream 5.0kb upstream 5830 true scaffold0728: 1-5830 Medicago truncatula
Medtr0728s0020 5.0kb upstream 5.0kb upstream 3844 false scaffold0728: 1-3844 Medicago truncatula
Medtr0728s0020 5.0kb downstream 5.0kb downstream 3489 true scaffold0728: 3845-7333 Medicago truncatula
Medtr0728s0020 5.0kb downstream 5.0kb downstream 1503 false scaffold0728: 5831-7333 Medicago truncatula
Medtr0728s0020 10.0kb upstream 10.0kb upstream 5830 true scaffold0728: 1-5830 Medicago truncatula
Medtr0728s0020 10.0kb upstream 10.0kb upstream 3844 false scaffold0728: 1-3844 Medicago truncatula
Medtr0728s0020 10.0kb downstream 10.0kb downstream 3489 true scaffold0728: 3845-7333 Medicago truncatula
Medtr0728s0020 10.0kb downstream 10.0kb downstream 1503 false scaffold0728: 5831-7333 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298884 5265 Fabidae View MSA
124070984 5270 Rosid View MSA
123746400 5271 Pentapetalae View MSA
122787606 5272 Eudicot View MSA
122046013 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain