Gene : Medtr0702s0030 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR12220//PTHR12220:SF14 - 50S/60S RIBOSOMAL PROTEIN L16 Description:  50S ribosomal protein L16
Genomic Order:  3 Name:  ? Medtr0702s0030
Secondary Identifier:  ? PAC:31061972
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0702s0030 0.5kb upstream 0.5kb upstream 788 true scaffold0702: 6428-7215 Medicago truncatula
Medtr0702s0030 0.5kb upstream 0.5kb upstream 500 false scaffold0702: 6428-6927 Medicago truncatula
Medtr0702s0030 0.5kb downstream 0.5kb downstream 781 true scaffold0702: 6928-7708 Medicago truncatula
Medtr0702s0030 0.5kb downstream 0.5kb downstream 493 false scaffold0702: 7216-7708 Medicago truncatula
Medtr0702s0030 1.0kb upstream 1.0kb upstream 1288 true scaffold0702: 5928-7215 Medicago truncatula
Medtr0702s0030 1.0kb upstream 1.0kb upstream 1000 false scaffold0702: 5928-6927 Medicago truncatula
Medtr0702s0030 1.0kb downstream 1.0kb downstream 781 true scaffold0702: 6928-7708 Medicago truncatula
Medtr0702s0030 1.0kb downstream 1.0kb downstream 493 false scaffold0702: 7216-7708 Medicago truncatula
Medtr0702s0030 2.0kb upstream 2.0kb upstream 2288 true scaffold0702: 4928-7215 Medicago truncatula
Medtr0702s0030 2.0kb upstream 2.0kb upstream 2000 false scaffold0702: 4928-6927 Medicago truncatula
Medtr0702s0030 2.0kb downstream 2.0kb downstream 781 true scaffold0702: 6928-7708 Medicago truncatula
Medtr0702s0030 2.0kb downstream 2.0kb downstream 493 false scaffold0702: 7216-7708 Medicago truncatula
Medtr0702s0030 5.0kb upstream 5.0kb upstream 5288 true scaffold0702: 1928-7215 Medicago truncatula
Medtr0702s0030 5.0kb upstream 5.0kb upstream 5000 false scaffold0702: 1928-6927 Medicago truncatula
Medtr0702s0030 5.0kb downstream 5.0kb downstream 781 true scaffold0702: 6928-7708 Medicago truncatula
Medtr0702s0030 5.0kb downstream 5.0kb downstream 493 false scaffold0702: 7216-7708 Medicago truncatula
Medtr0702s0030 10.0kb upstream 10.0kb upstream 7215 true scaffold0702: 1-7215 Medicago truncatula
Medtr0702s0030 10.0kb upstream 10.0kb upstream 6927 false scaffold0702: 1-6927 Medicago truncatula
Medtr0702s0030 10.0kb downstream 10.0kb downstream 781 true scaffold0702: 6928-7708 Medicago truncatula
Medtr0702s0030 10.0kb downstream 10.0kb downstream 493 false scaffold0702: 7216-7708 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122272226 5265 Fabidae View MSA
124042678 5270 Rosid View MSA
123748871 5271 Pentapetalae View MSA
122796002 5272 Eudicot View MSA
122041743 5273 Angiosperm View MSA
123429161 5275 Viridiplantae View MSA
121350825 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain