Gene : Medtr0699s0020 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10902 - 60S RIBOSOMAL PROTEIN L35A Description:  60S ribosomal protein L35a-3
Genomic Order:  2 Name:  ? Medtr0699s0020
Secondary Identifier:  ? PAC:31106212
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0699s0020 0.5kb upstream 0.5kb upstream 2854 true scaffold0699: 4886-7739 Medicago truncatula
Medtr0699s0020 0.5kb upstream 0.5kb upstream 92 false scaffold0699: 7648-7739 Medicago truncatula
Medtr0699s0020 0.5kb downstream 0.5kb downstream 3262 true scaffold0699: 4386-7647 Medicago truncatula
Medtr0699s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0699: 4386-4885 Medicago truncatula
Medtr0699s0020 1.0kb upstream 1.0kb upstream 2854 true scaffold0699: 4886-7739 Medicago truncatula
Medtr0699s0020 1.0kb upstream 1.0kb upstream 92 false scaffold0699: 7648-7739 Medicago truncatula
Medtr0699s0020 1.0kb downstream 1.0kb downstream 3762 true scaffold0699: 3886-7647 Medicago truncatula
Medtr0699s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0699: 3886-4885 Medicago truncatula
Medtr0699s0020 2.0kb upstream 2.0kb upstream 2854 true scaffold0699: 4886-7739 Medicago truncatula
Medtr0699s0020 2.0kb upstream 2.0kb upstream 92 false scaffold0699: 7648-7739 Medicago truncatula
Medtr0699s0020 2.0kb downstream 2.0kb downstream 4762 true scaffold0699: 2886-7647 Medicago truncatula
Medtr0699s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0699: 2886-4885 Medicago truncatula
Medtr0699s0020 5.0kb upstream 5.0kb upstream 2854 true scaffold0699: 4886-7739 Medicago truncatula
Medtr0699s0020 5.0kb upstream 5.0kb upstream 92 false scaffold0699: 7648-7739 Medicago truncatula
Medtr0699s0020 5.0kb downstream 5.0kb downstream 7647 true scaffold0699: 1-7647 Medicago truncatula
Medtr0699s0020 5.0kb downstream 5.0kb downstream 4885 false scaffold0699: 1-4885 Medicago truncatula
Medtr0699s0020 10.0kb upstream 10.0kb upstream 2854 true scaffold0699: 4886-7739 Medicago truncatula
Medtr0699s0020 10.0kb upstream 10.0kb upstream 92 false scaffold0699: 7648-7739 Medicago truncatula
Medtr0699s0020 10.0kb downstream 10.0kb downstream 7647 true scaffold0699: 1-7647 Medicago truncatula
Medtr0699s0020 10.0kb downstream 10.0kb downstream 4885 false scaffold0699: 1-4885 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310712 5265 Fabidae View MSA
124063370 5270 Rosid View MSA
123751278 5271 Pentapetalae View MSA
122792399 5272 Eudicot View MSA
122043317 5273 Angiosperm View MSA
121349974 5274 Embryophyte View MSA
123428152 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.115       Low
cufflinks 11.821     High  
cufflinks 8.585        
cufflinks 17.922     High High
cufflinks 19.999     High High
cufflinks 7.663       Low
cufflinks 12.588     High  
cufflinks 11.63     High  
cufflinks 18.343     High High

0 Strain