Gene : Medtr0915s0010 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG0328 - Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily Description:  DEAD-box ATP-dependent RNA helicase
Genomic Order:  1 Name:  ? Medtr0915s0010
Secondary Identifier:  ? PAC:31115461
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0915s0010 0.5kb upstream 0.5kb upstream 2998 true scaffold0915: 1058-4055 Medicago truncatula
Medtr0915s0010 0.5kb upstream 0.5kb upstream 500 false scaffold0915: 3556-4055 Medicago truncatula
Medtr0915s0010 0.5kb downstream 0.5kb downstream 2998 true scaffold0915: 558-3555 Medicago truncatula
Medtr0915s0010 0.5kb downstream 0.5kb downstream 500 false scaffold0915: 558-1057 Medicago truncatula
Medtr0915s0010 1.0kb upstream 1.0kb upstream 3427 true scaffold0915: 1058-4484 Medicago truncatula
Medtr0915s0010 1.0kb upstream 1.0kb upstream 929 false scaffold0915: 3556-4484 Medicago truncatula
Medtr0915s0010 1.0kb downstream 1.0kb downstream 3498 true scaffold0915: 58-3555 Medicago truncatula
Medtr0915s0010 1.0kb downstream 1.0kb downstream 1000 false scaffold0915: 58-1057 Medicago truncatula
Medtr0915s0010 2.0kb upstream 2.0kb upstream 3427 true scaffold0915: 1058-4484 Medicago truncatula
Medtr0915s0010 2.0kb upstream 2.0kb upstream 929 false scaffold0915: 3556-4484 Medicago truncatula
Medtr0915s0010 2.0kb downstream 2.0kb downstream 3555 true scaffold0915: 1-3555 Medicago truncatula
Medtr0915s0010 2.0kb downstream 2.0kb downstream 1057 false scaffold0915: 1-1057 Medicago truncatula
Medtr0915s0010 5.0kb upstream 5.0kb upstream 3427 true scaffold0915: 1058-4484 Medicago truncatula
Medtr0915s0010 5.0kb upstream 5.0kb upstream 929 false scaffold0915: 3556-4484 Medicago truncatula
Medtr0915s0010 5.0kb downstream 5.0kb downstream 3555 true scaffold0915: 1-3555 Medicago truncatula
Medtr0915s0010 5.0kb downstream 5.0kb downstream 1057 false scaffold0915: 1-1057 Medicago truncatula
Medtr0915s0010 10.0kb upstream 10.0kb upstream 3427 true scaffold0915: 1058-4484 Medicago truncatula
Medtr0915s0010 10.0kb upstream 10.0kb upstream 929 false scaffold0915: 3556-4484 Medicago truncatula
Medtr0915s0010 10.0kb downstream 10.0kb downstream 3555 true scaffold0915: 1-3555 Medicago truncatula
Medtr0915s0010 10.0kb downstream 10.0kb downstream 1057 false scaffold0915: 1-1057 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309900 5265 Fabidae View MSA
124074899 5270 Rosid View MSA
123752818 5271 Pentapetalae View MSA
122797459 5272 Eudicot View MSA
122050578 5273 Angiosperm View MSA
123429061 5275 Viridiplantae View MSA
121349468 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.183        
cufflinks 0.31        
cufflinks 0.343        
cufflinks 0.299        
cufflinks 0.396        
cufflinks 0.044     Low Low
cufflinks 0.288        
cufflinks 0.332        
cufflinks 0.332        

0 Strain