Gene : Medtr0907s0020 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR33057:SF17 - GB Description:  ovate transcriptional repressor
Genomic Order:  1 Name:  ? Medtr0907s0020
Secondary Identifier:  ? PAC:31061794
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0907s0020 0.5kb upstream 0.5kb upstream 1140 true scaffold0907: 2806-3945 Medicago truncatula
Medtr0907s0020 0.5kb upstream 0.5kb upstream 500 false scaffold0907: 3446-3945 Medicago truncatula
Medtr0907s0020 0.5kb downstream 0.5kb downstream 1140 true scaffold0907: 2306-3445 Medicago truncatula
Medtr0907s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0907: 2306-2805 Medicago truncatula
Medtr0907s0020 1.0kb upstream 1.0kb upstream 1640 true scaffold0907: 2806-4445 Medicago truncatula
Medtr0907s0020 1.0kb upstream 1.0kb upstream 1000 false scaffold0907: 3446-4445 Medicago truncatula
Medtr0907s0020 1.0kb downstream 1.0kb downstream 1640 true scaffold0907: 1806-3445 Medicago truncatula
Medtr0907s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0907: 1806-2805 Medicago truncatula
Medtr0907s0020 2.0kb upstream 2.0kb upstream 1760 true scaffold0907: 2806-4565 Medicago truncatula
Medtr0907s0020 2.0kb upstream 2.0kb upstream 1120 false scaffold0907: 3446-4565 Medicago truncatula
Medtr0907s0020 2.0kb downstream 2.0kb downstream 2640 true scaffold0907: 806-3445 Medicago truncatula
Medtr0907s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0907: 806-2805 Medicago truncatula
Medtr0907s0020 5.0kb upstream 5.0kb upstream 1760 true scaffold0907: 2806-4565 Medicago truncatula
Medtr0907s0020 5.0kb upstream 5.0kb upstream 1120 false scaffold0907: 3446-4565 Medicago truncatula
Medtr0907s0020 5.0kb downstream 5.0kb downstream 3445 true scaffold0907: 1-3445 Medicago truncatula
Medtr0907s0020 5.0kb downstream 5.0kb downstream 2805 false scaffold0907: 1-2805 Medicago truncatula
Medtr0907s0020 10.0kb upstream 10.0kb upstream 1760 true scaffold0907: 2806-4565 Medicago truncatula
Medtr0907s0020 10.0kb upstream 10.0kb upstream 1120 false scaffold0907: 3446-4565 Medicago truncatula
Medtr0907s0020 10.0kb downstream 10.0kb downstream 3445 true scaffold0907: 1-3445 Medicago truncatula
Medtr0907s0020 10.0kb downstream 10.0kb downstream 2805 false scaffold0907: 1-2805 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315278 5265 Fabidae View MSA
124070173 5270 Rosid View MSA
123748591 5271 Pentapetalae View MSA
122791158 5272 Eudicot View MSA
122048787 5273 Angiosperm View MSA
121311113 5274 Embryophyte View MSA
123348456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.137       Low
cufflinks 0.493        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.375        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.322        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain