Gene : Medtr0874s0020 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR24223:SF165 - ABC TRANSPORTER C FAMILY MEMBER 15-RELATED Description:  ABC transporter C family-like protein
Genomic Order:  2 Name:  ? Medtr0874s0020
Secondary Identifier:  ? PAC:31061819
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0874s0020 0.5kb upstream 0.5kb upstream 2702 true scaffold0874: 2209-4910 Medicago truncatula
Medtr0874s0020 0.5kb upstream 0.5kb upstream 19 false scaffold0874: 4892-4910 Medicago truncatula
Medtr0874s0020 0.5kb downstream 0.5kb downstream 3183 true scaffold0874: 1709-4891 Medicago truncatula
Medtr0874s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0874: 1709-2208 Medicago truncatula
Medtr0874s0020 1.0kb upstream 1.0kb upstream 2702 true scaffold0874: 2209-4910 Medicago truncatula
Medtr0874s0020 1.0kb upstream 1.0kb upstream 19 false scaffold0874: 4892-4910 Medicago truncatula
Medtr0874s0020 1.0kb downstream 1.0kb downstream 3683 true scaffold0874: 1209-4891 Medicago truncatula
Medtr0874s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0874: 1209-2208 Medicago truncatula
Medtr0874s0020 2.0kb upstream 2.0kb upstream 2702 true scaffold0874: 2209-4910 Medicago truncatula
Medtr0874s0020 2.0kb upstream 2.0kb upstream 19 false scaffold0874: 4892-4910 Medicago truncatula
Medtr0874s0020 2.0kb downstream 2.0kb downstream 4683 true scaffold0874: 209-4891 Medicago truncatula
Medtr0874s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0874: 209-2208 Medicago truncatula
Medtr0874s0020 5.0kb upstream 5.0kb upstream 2702 true scaffold0874: 2209-4910 Medicago truncatula
Medtr0874s0020 5.0kb upstream 5.0kb upstream 19 false scaffold0874: 4892-4910 Medicago truncatula
Medtr0874s0020 5.0kb downstream 5.0kb downstream 4891 true scaffold0874: 1-4891 Medicago truncatula
Medtr0874s0020 5.0kb downstream 5.0kb downstream 2208 false scaffold0874: 1-2208 Medicago truncatula
Medtr0874s0020 10.0kb upstream 10.0kb upstream 2702 true scaffold0874: 2209-4910 Medicago truncatula
Medtr0874s0020 10.0kb upstream 10.0kb upstream 19 false scaffold0874: 4892-4910 Medicago truncatula
Medtr0874s0020 10.0kb downstream 10.0kb downstream 4891 true scaffold0874: 1-4891 Medicago truncatula
Medtr0874s0020 10.0kb downstream 10.0kb downstream 2208 false scaffold0874: 1-2208 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303592 5265 Fabidae View MSA
124074189 5270 Rosid View MSA
123753057 5271 Pentapetalae View MSA
122797435 5272 Eudicot View MSA
122051642 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350540 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.888       High
cufflinks 0.842        
cufflinks 0.24        
cufflinks 0.026     Low Low
cufflinks 0.552        
cufflinks 0.082     Low  
cufflinks 0.112        
cufflinks 0.51        
cufflinks 0.05     Low Low

0 Strain