Gene : Medtr0840s0020 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF02924 - Bacteriophage lambda head decoration protein D (HDPD) Description:  phage protein Gp20
Genomic Order:  2 Name:  ? Medtr0840s0020
Secondary Identifier:  ? PAC:31076694
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0840s0020 0.5kb upstream 0.5kb upstream 2789 true scaffold0840: 2609-5397 Medicago truncatula
Medtr0840s0020 0.5kb upstream 0.5kb upstream 123 false scaffold0840: 5275-5397 Medicago truncatula
Medtr0840s0020 0.5kb downstream 0.5kb downstream 3166 true scaffold0840: 2109-5274 Medicago truncatula
Medtr0840s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0840: 2109-2608 Medicago truncatula
Medtr0840s0020 1.0kb upstream 1.0kb upstream 2789 true scaffold0840: 2609-5397 Medicago truncatula
Medtr0840s0020 1.0kb upstream 1.0kb upstream 123 false scaffold0840: 5275-5397 Medicago truncatula
Medtr0840s0020 1.0kb downstream 1.0kb downstream 3666 true scaffold0840: 1609-5274 Medicago truncatula
Medtr0840s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0840: 1609-2608 Medicago truncatula
Medtr0840s0020 2.0kb upstream 2.0kb upstream 2789 true scaffold0840: 2609-5397 Medicago truncatula
Medtr0840s0020 2.0kb upstream 2.0kb upstream 123 false scaffold0840: 5275-5397 Medicago truncatula
Medtr0840s0020 2.0kb downstream 2.0kb downstream 4666 true scaffold0840: 609-5274 Medicago truncatula
Medtr0840s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0840: 609-2608 Medicago truncatula
Medtr0840s0020 5.0kb upstream 5.0kb upstream 2789 true scaffold0840: 2609-5397 Medicago truncatula
Medtr0840s0020 5.0kb upstream 5.0kb upstream 123 false scaffold0840: 5275-5397 Medicago truncatula
Medtr0840s0020 5.0kb downstream 5.0kb downstream 5274 true scaffold0840: 1-5274 Medicago truncatula
Medtr0840s0020 5.0kb downstream 5.0kb downstream 2608 false scaffold0840: 1-2608 Medicago truncatula
Medtr0840s0020 10.0kb upstream 10.0kb upstream 2789 true scaffold0840: 2609-5397 Medicago truncatula
Medtr0840s0020 10.0kb upstream 10.0kb upstream 123 false scaffold0840: 5275-5397 Medicago truncatula
Medtr0840s0020 10.0kb downstream 10.0kb downstream 5274 true scaffold0840: 1-5274 Medicago truncatula
Medtr0840s0020 10.0kb downstream 10.0kb downstream 2608 false scaffold0840: 1-2608 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632228 5273 Angiosperm Singleton cluster - no MSA
122270914 5265 Fabidae Singleton cluster - no MSA
124011585 5270 Rosid Singleton cluster - no MSA
123585484 5271 Pentapetalae Singleton cluster - no MSA
122620181 5272 Eudicot Singleton cluster - no MSA
120904332 5274 Embryophyte Singleton cluster - no MSA
122944987 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain