Gene : Medtr1101s0010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF02954 - Bacterial regulatory protein, Fis family (HTH_8) Description:  phenol degradative protein activator, putative
Genomic Order:  1 Name:  ? Medtr1101s0010
Secondary Identifier:  ? PAC:31106036
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1101s0010 0.5kb upstream 0.5kb upstream 1442 true scaffold1101: 363-1804 Medicago truncatula
Medtr1101s0010 0.5kb upstream 0.5kb upstream 500 false scaffold1101: 363-862 Medicago truncatula
Medtr1101s0010 0.5kb downstream 0.5kb downstream 1442 true scaffold1101: 863-2304 Medicago truncatula
Medtr1101s0010 0.5kb downstream 0.5kb downstream 500 false scaffold1101: 1805-2304 Medicago truncatula
Medtr1101s0010 1.0kb upstream 1.0kb upstream 1804 true scaffold1101: 1-1804 Medicago truncatula
Medtr1101s0010 1.0kb upstream 1.0kb upstream 862 false scaffold1101: 1-862 Medicago truncatula
Medtr1101s0010 1.0kb downstream 1.0kb downstream 1942 true scaffold1101: 863-2804 Medicago truncatula
Medtr1101s0010 1.0kb downstream 1.0kb downstream 1000 false scaffold1101: 1805-2804 Medicago truncatula
Medtr1101s0010 2.0kb upstream 2.0kb upstream 1804 true scaffold1101: 1-1804 Medicago truncatula
Medtr1101s0010 2.0kb upstream 2.0kb upstream 862 false scaffold1101: 1-862 Medicago truncatula
Medtr1101s0010 2.0kb downstream 2.0kb downstream 2024 true scaffold1101: 863-2886 Medicago truncatula
Medtr1101s0010 2.0kb downstream 2.0kb downstream 1082 false scaffold1101: 1805-2886 Medicago truncatula
Medtr1101s0010 5.0kb upstream 5.0kb upstream 1804 true scaffold1101: 1-1804 Medicago truncatula
Medtr1101s0010 5.0kb upstream 5.0kb upstream 862 false scaffold1101: 1-862 Medicago truncatula
Medtr1101s0010 5.0kb downstream 5.0kb downstream 2024 true scaffold1101: 863-2886 Medicago truncatula
Medtr1101s0010 5.0kb downstream 5.0kb downstream 1082 false scaffold1101: 1805-2886 Medicago truncatula
Medtr1101s0010 10.0kb upstream 10.0kb upstream 1804 true scaffold1101: 1-1804 Medicago truncatula
Medtr1101s0010 10.0kb upstream 10.0kb upstream 862 false scaffold1101: 1-862 Medicago truncatula
Medtr1101s0010 10.0kb downstream 10.0kb downstream 2024 true scaffold1101: 863-2886 Medicago truncatula
Medtr1101s0010 10.0kb downstream 10.0kb downstream 1082 false scaffold1101: 1805-2886 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632305 5273 Angiosperm Singleton cluster - no MSA
122270996 5265 Fabidae Singleton cluster - no MSA
124011662 5270 Rosid Singleton cluster - no MSA
123585561 5271 Pentapetalae Singleton cluster - no MSA
122620258 5272 Eudicot Singleton cluster - no MSA
120904409 5274 Embryophyte Singleton cluster - no MSA
122945061 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain