Gene : Medtr0135s0060 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  6 Name:  ? Medtr0135s0060
Secondary Identifier:  ? PAC:31084529
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0135s0060 0.5kb upstream 0.5kb upstream 683 true scaffold0135: 24446-25128 Medicago truncatula
Medtr0135s0060 0.5kb upstream 0.5kb upstream 500 false scaffold0135: 24629-25128 Medicago truncatula
Medtr0135s0060 0.5kb downstream 0.5kb downstream 683 true scaffold0135: 23946-24628 Medicago truncatula
Medtr0135s0060 0.5kb downstream 0.5kb downstream 500 false scaffold0135: 23946-24445 Medicago truncatula
Medtr0135s0060 1.0kb upstream 1.0kb upstream 1183 true scaffold0135: 24446-25628 Medicago truncatula
Medtr0135s0060 1.0kb upstream 1.0kb upstream 1000 false scaffold0135: 24629-25628 Medicago truncatula
Medtr0135s0060 1.0kb downstream 1.0kb downstream 1183 true scaffold0135: 23446-24628 Medicago truncatula
Medtr0135s0060 1.0kb downstream 1.0kb downstream 1000 false scaffold0135: 23446-24445 Medicago truncatula
Medtr0135s0060 2.0kb upstream 2.0kb upstream 2183 true scaffold0135: 24446-26628 Medicago truncatula
Medtr0135s0060 2.0kb upstream 2.0kb upstream 2000 false scaffold0135: 24629-26628 Medicago truncatula
Medtr0135s0060 2.0kb downstream 2.0kb downstream 2183 true scaffold0135: 22446-24628 Medicago truncatula
Medtr0135s0060 2.0kb downstream 2.0kb downstream 2000 false scaffold0135: 22446-24445 Medicago truncatula
Medtr0135s0060 5.0kb upstream 5.0kb upstream 5183 true scaffold0135: 24446-29628 Medicago truncatula
Medtr0135s0060 5.0kb upstream 5.0kb upstream 5000 false scaffold0135: 24629-29628 Medicago truncatula
Medtr0135s0060 5.0kb downstream 5.0kb downstream 5183 true scaffold0135: 19446-24628 Medicago truncatula
Medtr0135s0060 5.0kb downstream 5.0kb downstream 5000 false scaffold0135: 19446-24445 Medicago truncatula
Medtr0135s0060 10.0kb upstream 10.0kb upstream 10183 true scaffold0135: 24446-34628 Medicago truncatula
Medtr0135s0060 10.0kb upstream 10.0kb upstream 10000 false scaffold0135: 24629-34628 Medicago truncatula
Medtr0135s0060 10.0kb downstream 10.0kb downstream 10183 true scaffold0135: 14446-24628 Medicago truncatula
Medtr0135s0060 10.0kb downstream 10.0kb downstream 10000 false scaffold0135: 14446-24445 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121633092 5273 Angiosperm View MSA
122271929 5265 Fabidae View MSA
124012490 5270 Rosid View MSA
123586351 5271 Pentapetalae View MSA
122621045 5272 Eudicot View MSA
120905196 5274 Embryophyte View MSA
122945845 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain