Gene : Medtr0137s0040 M. truncatula Mt4.0v1
Defline:  (1 of 70) PF03101 - FAR1 DNA-binding domain (FAR1) Description:  FAR1 DNA-binding domain protein
Genomic Order:  4 Name:  ? Medtr0137s0040
Secondary Identifier:  ? PAC:31092199
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0137s0040 0.5kb upstream 0.5kb upstream 1068 true scaffold0137: 10866-11933 Medicago truncatula
Medtr0137s0040 0.5kb upstream 0.5kb upstream 500 false scaffold0137: 10866-11365 Medicago truncatula
Medtr0137s0040 0.5kb downstream 0.5kb downstream 1068 true scaffold0137: 11366-12433 Medicago truncatula
Medtr0137s0040 0.5kb downstream 0.5kb downstream 500 false scaffold0137: 11934-12433 Medicago truncatula
Medtr0137s0040 1.0kb upstream 1.0kb upstream 1568 true scaffold0137: 10366-11933 Medicago truncatula
Medtr0137s0040 1.0kb upstream 1.0kb upstream 1000 false scaffold0137: 10366-11365 Medicago truncatula
Medtr0137s0040 1.0kb downstream 1.0kb downstream 1568 true scaffold0137: 11366-12933 Medicago truncatula
Medtr0137s0040 1.0kb downstream 1.0kb downstream 1000 false scaffold0137: 11934-12933 Medicago truncatula
Medtr0137s0040 2.0kb upstream 2.0kb upstream 2568 true scaffold0137: 9366-11933 Medicago truncatula
Medtr0137s0040 2.0kb upstream 2.0kb upstream 2000 false scaffold0137: 9366-11365 Medicago truncatula
Medtr0137s0040 2.0kb downstream 2.0kb downstream 2568 true scaffold0137: 11366-13933 Medicago truncatula
Medtr0137s0040 2.0kb downstream 2.0kb downstream 2000 false scaffold0137: 11934-13933 Medicago truncatula
Medtr0137s0040 5.0kb upstream 5.0kb upstream 5568 true scaffold0137: 6366-11933 Medicago truncatula
Medtr0137s0040 5.0kb upstream 5.0kb upstream 5000 false scaffold0137: 6366-11365 Medicago truncatula
Medtr0137s0040 5.0kb downstream 5.0kb downstream 5568 true scaffold0137: 11366-16933 Medicago truncatula
Medtr0137s0040 5.0kb downstream 5.0kb downstream 5000 false scaffold0137: 11934-16933 Medicago truncatula
Medtr0137s0040 10.0kb upstream 10.0kb upstream 10568 true scaffold0137: 1366-11933 Medicago truncatula
Medtr0137s0040 10.0kb upstream 10.0kb upstream 10000 false scaffold0137: 1366-11365 Medicago truncatula
Medtr0137s0040 10.0kb downstream 10.0kb downstream 10568 true scaffold0137: 11366-21933 Medicago truncatula
Medtr0137s0040 10.0kb downstream 10.0kb downstream 10000 false scaffold0137: 11934-21933 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029789 5273 Angiosperm View MSA
122270488 5265 Fabidae Singleton cluster - no MSA
124051094 5270 Rosid View MSA
123646852 5271 Pentapetalae View MSA
122680888 5272 Eudicot View MSA
121299070 5274 Embryophyte View MSA
123336993 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.367        
cufflinks 1.709        
cufflinks 1.885        
cufflinks 0.04     Low Low
cufflinks 1.69        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.481        
cufflinks 1.177        
cufflinks 0.257        

0 Strain