Gene : Medtr0160s0030 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR26374:SF175 - C2H2-LIKE ZINC FINGER PROTEIN-RELATED Description:  C2H2-type zinc finger protein, putative
Genomic Order:  2 Name:  ? Medtr0160s0030
Secondary Identifier:  ? PAC:31100900
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0160s0030 0.5kb upstream 0.5kb upstream 1991 true scaffold0160: 19377-21367 Medicago truncatula
Medtr0160s0030 0.5kb upstream 0.5kb upstream 500 false scaffold0160: 20868-21367 Medicago truncatula
Medtr0160s0030 0.5kb downstream 0.5kb downstream 1991 true scaffold0160: 18877-20867 Medicago truncatula
Medtr0160s0030 0.5kb downstream 0.5kb downstream 500 false scaffold0160: 18877-19376 Medicago truncatula
Medtr0160s0030 1.0kb upstream 1.0kb upstream 2491 true scaffold0160: 19377-21867 Medicago truncatula
Medtr0160s0030 1.0kb upstream 1.0kb upstream 1000 false scaffold0160: 20868-21867 Medicago truncatula
Medtr0160s0030 1.0kb downstream 1.0kb downstream 2491 true scaffold0160: 18377-20867 Medicago truncatula
Medtr0160s0030 1.0kb downstream 1.0kb downstream 1000 false scaffold0160: 18377-19376 Medicago truncatula
Medtr0160s0030 2.0kb upstream 2.0kb upstream 3491 true scaffold0160: 19377-22867 Medicago truncatula
Medtr0160s0030 2.0kb upstream 2.0kb upstream 2000 false scaffold0160: 20868-22867 Medicago truncatula
Medtr0160s0030 2.0kb downstream 2.0kb downstream 3491 true scaffold0160: 17377-20867 Medicago truncatula
Medtr0160s0030 2.0kb downstream 2.0kb downstream 2000 false scaffold0160: 17377-19376 Medicago truncatula
Medtr0160s0030 5.0kb upstream 5.0kb upstream 6491 true scaffold0160: 19377-25867 Medicago truncatula
Medtr0160s0030 5.0kb upstream 5.0kb upstream 5000 false scaffold0160: 20868-25867 Medicago truncatula
Medtr0160s0030 5.0kb downstream 5.0kb downstream 6491 true scaffold0160: 14377-20867 Medicago truncatula
Medtr0160s0030 5.0kb downstream 5.0kb downstream 5000 false scaffold0160: 14377-19376 Medicago truncatula
Medtr0160s0030 10.0kb upstream 10.0kb upstream 11491 true scaffold0160: 19377-30867 Medicago truncatula
Medtr0160s0030 10.0kb upstream 10.0kb upstream 10000 false scaffold0160: 20868-30867 Medicago truncatula
Medtr0160s0030 10.0kb downstream 10.0kb downstream 11491 true scaffold0160: 9377-20867 Medicago truncatula
Medtr0160s0030 10.0kb downstream 10.0kb downstream 10000 false scaffold0160: 9377-19376 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302776 5265 Fabidae View MSA
124072533 5270 Rosid View MSA
123753327 5271 Pentapetalae View MSA
122797874 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.258     High High
cufflinks 0.042     Low  
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.035     Low  
cufflinks 0.024     Low  

0 Strain