Gene : Medtr0147s0060 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11472:SF41 - ATP-DEPENDENT RNA HELICASE DDX11-RELATED Description:  rad3-related DNA helicase family protein
Genomic Order:  6 Name:  ? Medtr0147s0060
Secondary Identifier:  ? PAC:31100854
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0147s0060 0.5kb upstream 0.5kb upstream 5912 true scaffold0147: 15819-21730 Medicago truncatula
Medtr0147s0060 0.5kb upstream 0.5kb upstream 500 false scaffold0147: 21231-21730 Medicago truncatula
Medtr0147s0060 0.5kb downstream 0.5kb downstream 5912 true scaffold0147: 15319-21230 Medicago truncatula
Medtr0147s0060 0.5kb downstream 0.5kb downstream 500 false scaffold0147: 15319-15818 Medicago truncatula
Medtr0147s0060 1.0kb upstream 1.0kb upstream 6412 true scaffold0147: 15819-22230 Medicago truncatula
Medtr0147s0060 1.0kb upstream 1.0kb upstream 1000 false scaffold0147: 21231-22230 Medicago truncatula
Medtr0147s0060 1.0kb downstream 1.0kb downstream 6412 true scaffold0147: 14819-21230 Medicago truncatula
Medtr0147s0060 1.0kb downstream 1.0kb downstream 1000 false scaffold0147: 14819-15818 Medicago truncatula
Medtr0147s0060 2.0kb upstream 2.0kb upstream 7412 true scaffold0147: 15819-23230 Medicago truncatula
Medtr0147s0060 2.0kb upstream 2.0kb upstream 2000 false scaffold0147: 21231-23230 Medicago truncatula
Medtr0147s0060 2.0kb downstream 2.0kb downstream 7412 true scaffold0147: 13819-21230 Medicago truncatula
Medtr0147s0060 2.0kb downstream 2.0kb downstream 2000 false scaffold0147: 13819-15818 Medicago truncatula
Medtr0147s0060 5.0kb upstream 5.0kb upstream 10412 true scaffold0147: 15819-26230 Medicago truncatula
Medtr0147s0060 5.0kb upstream 5.0kb upstream 5000 false scaffold0147: 21231-26230 Medicago truncatula
Medtr0147s0060 5.0kb downstream 5.0kb downstream 10412 true scaffold0147: 10819-21230 Medicago truncatula
Medtr0147s0060 5.0kb downstream 5.0kb downstream 5000 false scaffold0147: 10819-15818 Medicago truncatula
Medtr0147s0060 10.0kb upstream 10.0kb upstream 15412 true scaffold0147: 15819-31230 Medicago truncatula
Medtr0147s0060 10.0kb upstream 10.0kb upstream 10000 false scaffold0147: 21231-31230 Medicago truncatula
Medtr0147s0060 10.0kb downstream 10.0kb downstream 15412 true scaffold0147: 5819-21230 Medicago truncatula
Medtr0147s0060 10.0kb downstream 10.0kb downstream 10000 false scaffold0147: 5819-15818 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305473 5265 Fabidae View MSA
124063086 5270 Rosid View MSA
123739060 5271 Pentapetalae View MSA
122791731 5272 Eudicot View MSA
122044733 5273 Angiosperm View MSA
121346490 5274 Embryophyte View MSA
123426390 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low  
cufflinks 0.064     Low  
cufflinks 0.04     Low  
cufflinks 0.004     Low Low
cufflinks 0.069        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.031     Low  
cufflinks 0.084     Low  

0 Strain