Gene : Medtr0182s0060 M. truncatula Mt4.0v1
Defline:  (1 of 94) PF03140 - Plant protein of unknown function (DUF247) Description:  DUF247 domain protein
Genomic Order:  3 Name:  ? Medtr0182s0060
Secondary Identifier:  ? PAC:31092248
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0182s0060 0.5kb upstream 0.5kb upstream 2374 true scaffold0182: 24733-27106 Medicago truncatula
Medtr0182s0060 0.5kb upstream 0.5kb upstream 500 false scaffold0182: 24733-25232 Medicago truncatula
Medtr0182s0060 0.5kb downstream 0.5kb downstream 2374 true scaffold0182: 25233-27606 Medicago truncatula
Medtr0182s0060 0.5kb downstream 0.5kb downstream 500 false scaffold0182: 27107-27606 Medicago truncatula
Medtr0182s0060 1.0kb upstream 1.0kb upstream 2874 true scaffold0182: 24233-27106 Medicago truncatula
Medtr0182s0060 1.0kb upstream 1.0kb upstream 1000 false scaffold0182: 24233-25232 Medicago truncatula
Medtr0182s0060 1.0kb downstream 1.0kb downstream 2874 true scaffold0182: 25233-28106 Medicago truncatula
Medtr0182s0060 1.0kb downstream 1.0kb downstream 1000 false scaffold0182: 27107-28106 Medicago truncatula
Medtr0182s0060 2.0kb upstream 2.0kb upstream 3874 true scaffold0182: 23233-27106 Medicago truncatula
Medtr0182s0060 2.0kb upstream 2.0kb upstream 2000 false scaffold0182: 23233-25232 Medicago truncatula
Medtr0182s0060 2.0kb downstream 2.0kb downstream 3874 true scaffold0182: 25233-29106 Medicago truncatula
Medtr0182s0060 2.0kb downstream 2.0kb downstream 2000 false scaffold0182: 27107-29106 Medicago truncatula
Medtr0182s0060 5.0kb upstream 5.0kb upstream 6874 true scaffold0182: 20233-27106 Medicago truncatula
Medtr0182s0060 5.0kb upstream 5.0kb upstream 5000 false scaffold0182: 20233-25232 Medicago truncatula
Medtr0182s0060 5.0kb downstream 5.0kb downstream 6874 true scaffold0182: 25233-32106 Medicago truncatula
Medtr0182s0060 5.0kb downstream 5.0kb downstream 5000 false scaffold0182: 27107-32106 Medicago truncatula
Medtr0182s0060 10.0kb upstream 10.0kb upstream 11874 true scaffold0182: 15233-27106 Medicago truncatula
Medtr0182s0060 10.0kb upstream 10.0kb upstream 10000 false scaffold0182: 15233-25232 Medicago truncatula
Medtr0182s0060 10.0kb downstream 10.0kb downstream 9285 true scaffold0182: 25233-34517 Medicago truncatula
Medtr0182s0060 10.0kb downstream 10.0kb downstream 7411 false scaffold0182: 27107-34517 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310383 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.323        
cufflinks 0.125       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.644       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.383        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain