Gene : Medtr0196s0020 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR24223:SF192 - ABC TRANSPORTER C FAMILY MEMBER 10 Description:  multidrug resistance-associated protein ABC domain protein
Genomic Order:  1 Name:  ? Medtr0196s0020
Secondary Identifier:  ? PAC:31084929
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0196s0020 0.5kb upstream 0.5kb upstream 7129 true scaffold0196: 10198-17326 Medicago truncatula
Medtr0196s0020 0.5kb upstream 0.5kb upstream 500 false scaffold0196: 10198-10697 Medicago truncatula
Medtr0196s0020 0.5kb downstream 0.5kb downstream 7129 true scaffold0196: 10698-17826 Medicago truncatula
Medtr0196s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0196: 17327-17826 Medicago truncatula
Medtr0196s0020 1.0kb upstream 1.0kb upstream 7629 true scaffold0196: 9698-17326 Medicago truncatula
Medtr0196s0020 1.0kb upstream 1.0kb upstream 1000 false scaffold0196: 9698-10697 Medicago truncatula
Medtr0196s0020 1.0kb downstream 1.0kb downstream 7629 true scaffold0196: 10698-18326 Medicago truncatula
Medtr0196s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0196: 17327-18326 Medicago truncatula
Medtr0196s0020 2.0kb upstream 2.0kb upstream 8629 true scaffold0196: 8698-17326 Medicago truncatula
Medtr0196s0020 2.0kb upstream 2.0kb upstream 2000 false scaffold0196: 8698-10697 Medicago truncatula
Medtr0196s0020 2.0kb downstream 2.0kb downstream 8629 true scaffold0196: 10698-19326 Medicago truncatula
Medtr0196s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0196: 17327-19326 Medicago truncatula
Medtr0196s0020 5.0kb upstream 5.0kb upstream 11629 true scaffold0196: 5698-17326 Medicago truncatula
Medtr0196s0020 5.0kb upstream 5.0kb upstream 5000 false scaffold0196: 5698-10697 Medicago truncatula
Medtr0196s0020 5.0kb downstream 5.0kb downstream 11629 true scaffold0196: 10698-22326 Medicago truncatula
Medtr0196s0020 5.0kb downstream 5.0kb downstream 5000 false scaffold0196: 17327-22326 Medicago truncatula
Medtr0196s0020 10.0kb upstream 10.0kb upstream 16629 true scaffold0196: 698-17326 Medicago truncatula
Medtr0196s0020 10.0kb upstream 10.0kb upstream 10000 false scaffold0196: 698-10697 Medicago truncatula
Medtr0196s0020 10.0kb downstream 10.0kb downstream 16629 true scaffold0196: 10698-27326 Medicago truncatula
Medtr0196s0020 10.0kb downstream 10.0kb downstream 10000 false scaffold0196: 17327-27326 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121655830 5273 Angiosperm View MSA
122296481 5265 Fabidae View MSA
124035663 5270 Rosid View MSA
123609146 5271 Pentapetalae View MSA
122643796 5272 Eudicot View MSA
120927929 5274 Embryophyte View MSA
122968571 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low  
cufflinks 0.01     Low  
cufflinks 0.012     Low  
cufflinks 0.036     Low  
cufflinks 0.007     Low Low
cufflinks 0.053     Low  
cufflinks 0.09       High
cufflinks 0.008     Low Low
cufflinks 0.113       High

0 Strain