Gene : Medtr0229s0020 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF01396//PF13368 - Topoisomerase DNA binding C4 zinc finger (zf-C4_Topoisom) // Topoisomerase C-terminal repeat (Toprim_C_rpt) Description:  DNA topoisomerase
Genomic Order:  2 Name:  ? Medtr0229s0020
Secondary Identifier:  ? PAC:31061770
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0229s0020 0.5kb upstream 0.5kb upstream 4898 true scaffold0229: 5124-10021 Medicago truncatula
Medtr0229s0020 0.5kb upstream 0.5kb upstream 500 false scaffold0229: 9522-10021 Medicago truncatula
Medtr0229s0020 0.5kb downstream 0.5kb downstream 4898 true scaffold0229: 4624-9521 Medicago truncatula
Medtr0229s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0229: 4624-5123 Medicago truncatula
Medtr0229s0020 1.0kb upstream 1.0kb upstream 5398 true scaffold0229: 5124-10521 Medicago truncatula
Medtr0229s0020 1.0kb upstream 1.0kb upstream 1000 false scaffold0229: 9522-10521 Medicago truncatula
Medtr0229s0020 1.0kb downstream 1.0kb downstream 5398 true scaffold0229: 4124-9521 Medicago truncatula
Medtr0229s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0229: 4124-5123 Medicago truncatula
Medtr0229s0020 2.0kb upstream 2.0kb upstream 6398 true scaffold0229: 5124-11521 Medicago truncatula
Medtr0229s0020 2.0kb upstream 2.0kb upstream 2000 false scaffold0229: 9522-11521 Medicago truncatula
Medtr0229s0020 2.0kb downstream 2.0kb downstream 6398 true scaffold0229: 3124-9521 Medicago truncatula
Medtr0229s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0229: 3124-5123 Medicago truncatula
Medtr0229s0020 5.0kb upstream 5.0kb upstream 9398 true scaffold0229: 5124-14521 Medicago truncatula
Medtr0229s0020 5.0kb upstream 5.0kb upstream 5000 false scaffold0229: 9522-14521 Medicago truncatula
Medtr0229s0020 5.0kb downstream 5.0kb downstream 9398 true scaffold0229: 124-9521 Medicago truncatula
Medtr0229s0020 5.0kb downstream 5.0kb downstream 5000 false scaffold0229: 124-5123 Medicago truncatula
Medtr0229s0020 10.0kb upstream 10.0kb upstream 14398 true scaffold0229: 5124-19521 Medicago truncatula
Medtr0229s0020 10.0kb upstream 10.0kb upstream 10000 false scaffold0229: 9522-19521 Medicago truncatula
Medtr0229s0020 10.0kb downstream 10.0kb downstream 9521 true scaffold0229: 1-9521 Medicago truncatula
Medtr0229s0020 10.0kb downstream 10.0kb downstream 5123 false scaffold0229: 1-5123 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028131 5273 Angiosperm View MSA
122294705 5265 Fabidae View MSA
124039405 5270 Rosid View MSA
123611302 5271 Pentapetalae View MSA
122645873 5272 Eudicot View MSA
121297669 5274 Embryophyte View MSA
123335701 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain