Gene : Medtr0211s0080 M. truncatula Mt4.0v1
Defline:  (1 of 49) PF00197 - Trypsin and protease inhibitor (Kunitz_legume) Description:  Kunitz type trypsin inhibitor
Genomic Order:  2 Name:  ? Medtr0211s0080
Secondary Identifier:  ? PAC:31106261
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0211s0080 0.5kb upstream 0.5kb upstream 1217 true scaffold0211: 25794-27010 Medicago truncatula
Medtr0211s0080 0.5kb upstream 0.5kb upstream 500 false scaffold0211: 26511-27010 Medicago truncatula
Medtr0211s0080 0.5kb downstream 0.5kb downstream 1217 true scaffold0211: 25294-26510 Medicago truncatula
Medtr0211s0080 0.5kb downstream 0.5kb downstream 500 false scaffold0211: 25294-25793 Medicago truncatula
Medtr0211s0080 1.0kb upstream 1.0kb upstream 1717 true scaffold0211: 25794-27510 Medicago truncatula
Medtr0211s0080 1.0kb upstream 1.0kb upstream 1000 false scaffold0211: 26511-27510 Medicago truncatula
Medtr0211s0080 1.0kb downstream 1.0kb downstream 1717 true scaffold0211: 24794-26510 Medicago truncatula
Medtr0211s0080 1.0kb downstream 1.0kb downstream 1000 false scaffold0211: 24794-25793 Medicago truncatula
Medtr0211s0080 2.0kb upstream 2.0kb upstream 2717 true scaffold0211: 25794-28510 Medicago truncatula
Medtr0211s0080 2.0kb upstream 2.0kb upstream 2000 false scaffold0211: 26511-28510 Medicago truncatula
Medtr0211s0080 2.0kb downstream 2.0kb downstream 2717 true scaffold0211: 23794-26510 Medicago truncatula
Medtr0211s0080 2.0kb downstream 2.0kb downstream 2000 false scaffold0211: 23794-25793 Medicago truncatula
Medtr0211s0080 5.0kb upstream 5.0kb upstream 4468 true scaffold0211: 25794-30261 Medicago truncatula
Medtr0211s0080 5.0kb upstream 5.0kb upstream 3751 false scaffold0211: 26511-30261 Medicago truncatula
Medtr0211s0080 5.0kb downstream 5.0kb downstream 5717 true scaffold0211: 20794-26510 Medicago truncatula
Medtr0211s0080 5.0kb downstream 5.0kb downstream 5000 false scaffold0211: 20794-25793 Medicago truncatula
Medtr0211s0080 10.0kb upstream 10.0kb upstream 4468 true scaffold0211: 25794-30261 Medicago truncatula
Medtr0211s0080 10.0kb upstream 10.0kb upstream 3751 false scaffold0211: 26511-30261 Medicago truncatula
Medtr0211s0080 10.0kb downstream 10.0kb downstream 10717 true scaffold0211: 15794-26510 Medicago truncatula
Medtr0211s0080 10.0kb downstream 10.0kb downstream 10000 false scaffold0211: 15794-25793 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309979 5265 Fabidae View MSA
124070415 5270 Rosid View MSA
123749279 5271 Pentapetalae View MSA
122795954 5272 Eudicot View MSA
122043570 5273 Angiosperm View MSA
121310150 5274 Embryophyte View MSA
123347719 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain