Gene : Medtr0291s0010 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10024:SF236 - ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN Description:  calcium-dependent lipid-binding (CaLB domain) family protein
Genomic Order:  1 Name:  ? Medtr0291s0010
Secondary Identifier:  ? PAC:31092010
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0291s0010 0.5kb upstream 0.5kb upstream 3567 true scaffold0291: 2087-5653 Medicago truncatula
Medtr0291s0010 0.5kb upstream 0.5kb upstream 500 false scaffold0291: 5154-5653 Medicago truncatula
Medtr0291s0010 0.5kb downstream 0.5kb downstream 3567 true scaffold0291: 1587-5153 Medicago truncatula
Medtr0291s0010 0.5kb downstream 0.5kb downstream 500 false scaffold0291: 1587-2086 Medicago truncatula
Medtr0291s0010 1.0kb upstream 1.0kb upstream 4067 true scaffold0291: 2087-6153 Medicago truncatula
Medtr0291s0010 1.0kb upstream 1.0kb upstream 1000 false scaffold0291: 5154-6153 Medicago truncatula
Medtr0291s0010 1.0kb downstream 1.0kb downstream 4067 true scaffold0291: 1087-5153 Medicago truncatula
Medtr0291s0010 1.0kb downstream 1.0kb downstream 1000 false scaffold0291: 1087-2086 Medicago truncatula
Medtr0291s0010 2.0kb upstream 2.0kb upstream 5067 true scaffold0291: 2087-7153 Medicago truncatula
Medtr0291s0010 2.0kb upstream 2.0kb upstream 2000 false scaffold0291: 5154-7153 Medicago truncatula
Medtr0291s0010 2.0kb downstream 2.0kb downstream 5067 true scaffold0291: 87-5153 Medicago truncatula
Medtr0291s0010 2.0kb downstream 2.0kb downstream 2000 false scaffold0291: 87-2086 Medicago truncatula
Medtr0291s0010 5.0kb upstream 5.0kb upstream 8067 true scaffold0291: 2087-10153 Medicago truncatula
Medtr0291s0010 5.0kb upstream 5.0kb upstream 5000 false scaffold0291: 5154-10153 Medicago truncatula
Medtr0291s0010 5.0kb downstream 5.0kb downstream 5153 true scaffold0291: 1-5153 Medicago truncatula
Medtr0291s0010 5.0kb downstream 5.0kb downstream 2086 false scaffold0291: 1-2086 Medicago truncatula
Medtr0291s0010 10.0kb upstream 10.0kb upstream 13067 true scaffold0291: 2087-15153 Medicago truncatula
Medtr0291s0010 10.0kb upstream 10.0kb upstream 10000 false scaffold0291: 5154-15153 Medicago truncatula
Medtr0291s0010 10.0kb downstream 10.0kb downstream 5153 true scaffold0291: 1-5153 Medicago truncatula
Medtr0291s0010 10.0kb downstream 10.0kb downstream 2086 false scaffold0291: 1-2086 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305038 5265 Fabidae View MSA
124063852 5270 Rosid View MSA
123737482 5271 Pentapetalae View MSA
122796289 5272 Eudicot View MSA
122048920 5273 Angiosperm View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.726        
cufflinks 3.757        
cufflinks 5.281       High
cufflinks 1.043        
cufflinks 5.444       High
cufflinks 0.363       Low
cufflinks 0.884        
cufflinks 4.179        
cufflinks 0.754        

0 Strain