Gene : Medtr0280s0040 M. truncatula Mt4.0v1
Defline:  (1 of 13) PF00069//PF00954//PF01453//PF08276 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // PAN-like domain (PAN_2) Description:  G-type lectin S-receptor-like Serine/Threonine-kinase plant
Genomic Order:  3 Name:  ? Medtr0280s0040
Secondary Identifier:  ? PAC:31092121
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0280s0040 0.5kb upstream 0.5kb upstream 2972 true scaffold0280: 13776-16747 Medicago truncatula
Medtr0280s0040 0.5kb upstream 0.5kb upstream 500 false scaffold0280: 13776-14275 Medicago truncatula
Medtr0280s0040 0.5kb downstream 0.5kb downstream 2972 true scaffold0280: 14276-17247 Medicago truncatula
Medtr0280s0040 0.5kb downstream 0.5kb downstream 500 false scaffold0280: 16748-17247 Medicago truncatula
Medtr0280s0040 1.0kb upstream 1.0kb upstream 3472 true scaffold0280: 13276-16747 Medicago truncatula
Medtr0280s0040 1.0kb upstream 1.0kb upstream 1000 false scaffold0280: 13276-14275 Medicago truncatula
Medtr0280s0040 1.0kb downstream 1.0kb downstream 3472 true scaffold0280: 14276-17747 Medicago truncatula
Medtr0280s0040 1.0kb downstream 1.0kb downstream 1000 false scaffold0280: 16748-17747 Medicago truncatula
Medtr0280s0040 2.0kb upstream 2.0kb upstream 4472 true scaffold0280: 12276-16747 Medicago truncatula
Medtr0280s0040 2.0kb upstream 2.0kb upstream 2000 false scaffold0280: 12276-14275 Medicago truncatula
Medtr0280s0040 2.0kb downstream 2.0kb downstream 4472 true scaffold0280: 14276-18747 Medicago truncatula
Medtr0280s0040 2.0kb downstream 2.0kb downstream 2000 false scaffold0280: 16748-18747 Medicago truncatula
Medtr0280s0040 5.0kb upstream 5.0kb upstream 7472 true scaffold0280: 9276-16747 Medicago truncatula
Medtr0280s0040 5.0kb upstream 5.0kb upstream 5000 false scaffold0280: 9276-14275 Medicago truncatula
Medtr0280s0040 5.0kb downstream 5.0kb downstream 7472 true scaffold0280: 14276-21747 Medicago truncatula
Medtr0280s0040 5.0kb downstream 5.0kb downstream 5000 false scaffold0280: 16748-21747 Medicago truncatula
Medtr0280s0040 10.0kb upstream 10.0kb upstream 12472 true scaffold0280: 4276-16747 Medicago truncatula
Medtr0280s0040 10.0kb upstream 10.0kb upstream 10000 false scaffold0280: 4276-14275 Medicago truncatula
Medtr0280s0040 10.0kb downstream 10.0kb downstream 9655 true scaffold0280: 14276-23930 Medicago truncatula
Medtr0280s0040 10.0kb downstream 10.0kb downstream 7183 false scaffold0280: 16748-23930 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310372 5265 Fabidae View MSA
124073959 5270 Rosid View MSA
123747551 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.78     High  
cufflinks 1.054       Low
cufflinks 2.445        
cufflinks 9.136     High  
cufflinks 2.848        
cufflinks 10.571     High  
cufflinks 29.626     High High
cufflinks 1.392       Low
cufflinks 25.284     High High

0 Strain