Gene : Medtr0268s0080 M. truncatula Mt4.0v1
Defline:  (1 of 9) 1.17.4.1 - Ribonucleoside-diphosphate reductase / Ribonucleotide reductase Description:  ribonucleoside-diphosphate reductase small chain
Genomic Order:  5 Name:  ? Medtr0268s0080
Secondary Identifier:  ? PAC:31061717
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12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6126 Medicago truncatula pathologic  
Mtruncatula PWY-6545 Medicago truncatula pathologic  
Mtruncatula PWY-7184 Medicago truncatula pathologic  
Mtruncatula PWY-7210 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  
Mtruncatula PWY-7220 Medicago truncatula pathologic  
Mtruncatula PWY-7222 Medicago truncatula pathologic  
Mtruncatula PWY-7226 Medicago truncatula pathologic  
Mtruncatula PWY-7227 Medicago truncatula pathologic  
Mtruncatula PWY-7228 Medicago truncatula pathologic  
Mtruncatula PWY-7229 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0268s0080 0.5kb upstream 0.5kb upstream 1864 true scaffold0268: 21739-23602 Medicago truncatula
Medtr0268s0080 0.5kb upstream 0.5kb upstream 500 false scaffold0268: 21739-22238 Medicago truncatula
Medtr0268s0080 0.5kb downstream 0.5kb downstream 1864 true scaffold0268: 22239-24102 Medicago truncatula
Medtr0268s0080 0.5kb downstream 0.5kb downstream 500 false scaffold0268: 23603-24102 Medicago truncatula
Medtr0268s0080 1.0kb upstream 1.0kb upstream 2364 true scaffold0268: 21239-23602 Medicago truncatula
Medtr0268s0080 1.0kb upstream 1.0kb upstream 1000 false scaffold0268: 21239-22238 Medicago truncatula
Medtr0268s0080 1.0kb downstream 1.0kb downstream 2234 true scaffold0268: 22239-24472 Medicago truncatula
Medtr0268s0080 1.0kb downstream 1.0kb downstream 870 false scaffold0268: 23603-24472 Medicago truncatula
Medtr0268s0080 2.0kb upstream 2.0kb upstream 3364 true scaffold0268: 20239-23602 Medicago truncatula
Medtr0268s0080 2.0kb upstream 2.0kb upstream 2000 false scaffold0268: 20239-22238 Medicago truncatula
Medtr0268s0080 2.0kb downstream 2.0kb downstream 2234 true scaffold0268: 22239-24472 Medicago truncatula
Medtr0268s0080 2.0kb downstream 2.0kb downstream 870 false scaffold0268: 23603-24472 Medicago truncatula
Medtr0268s0080 5.0kb upstream 5.0kb upstream 6364 true scaffold0268: 17239-23602 Medicago truncatula
Medtr0268s0080 5.0kb upstream 5.0kb upstream 5000 false scaffold0268: 17239-22238 Medicago truncatula
Medtr0268s0080 5.0kb downstream 5.0kb downstream 2234 true scaffold0268: 22239-24472 Medicago truncatula
Medtr0268s0080 5.0kb downstream 5.0kb downstream 870 false scaffold0268: 23603-24472 Medicago truncatula
Medtr0268s0080 10.0kb upstream 10.0kb upstream 11364 true scaffold0268: 12239-23602 Medicago truncatula
Medtr0268s0080 10.0kb upstream 10.0kb upstream 10000 false scaffold0268: 12239-22238 Medicago truncatula
Medtr0268s0080 10.0kb downstream 10.0kb downstream 2234 true scaffold0268: 22239-24472 Medicago truncatula
Medtr0268s0080 10.0kb downstream 10.0kb downstream 870 false scaffold0268: 23603-24472 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309353 5265 Fabidae View MSA
124067883 5270 Rosid View MSA
123737275 5271 Pentapetalae View MSA
122787137 5272 Eudicot View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.371        
cufflinks 0.34        
cufflinks 0.11       Low
cufflinks 0.328        
cufflinks 0.214        
cufflinks 0.224        
cufflinks 0.64        
cufflinks 0.129        
cufflinks 2.577       High

0 Strain