Gene : Medtr0318s0020 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31371:SF4 - SIMILARITY TO UNKNOWN PROTEIN Description:  DUF3475 domain protein
Genomic Order:  2 Name:  ? Medtr0318s0020
Secondary Identifier:  ? PAC:31061809
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0318s0020 0.5kb upstream 0.5kb upstream 2486 true scaffold0318: 13685-16170 Medicago truncatula
Medtr0318s0020 0.5kb upstream 0.5kb upstream 500 false scaffold0318: 13685-14184 Medicago truncatula
Medtr0318s0020 0.5kb downstream 0.5kb downstream 2486 true scaffold0318: 14185-16670 Medicago truncatula
Medtr0318s0020 0.5kb downstream 0.5kb downstream 500 false scaffold0318: 16171-16670 Medicago truncatula
Medtr0318s0020 1.0kb upstream 1.0kb upstream 2986 true scaffold0318: 13185-16170 Medicago truncatula
Medtr0318s0020 1.0kb upstream 1.0kb upstream 1000 false scaffold0318: 13185-14184 Medicago truncatula
Medtr0318s0020 1.0kb downstream 1.0kb downstream 2986 true scaffold0318: 14185-17170 Medicago truncatula
Medtr0318s0020 1.0kb downstream 1.0kb downstream 1000 false scaffold0318: 16171-17170 Medicago truncatula
Medtr0318s0020 2.0kb upstream 2.0kb upstream 3986 true scaffold0318: 12185-16170 Medicago truncatula
Medtr0318s0020 2.0kb upstream 2.0kb upstream 2000 false scaffold0318: 12185-14184 Medicago truncatula
Medtr0318s0020 2.0kb downstream 2.0kb downstream 3986 true scaffold0318: 14185-18170 Medicago truncatula
Medtr0318s0020 2.0kb downstream 2.0kb downstream 2000 false scaffold0318: 16171-18170 Medicago truncatula
Medtr0318s0020 5.0kb upstream 5.0kb upstream 6986 true scaffold0318: 9185-16170 Medicago truncatula
Medtr0318s0020 5.0kb upstream 5.0kb upstream 5000 false scaffold0318: 9185-14184 Medicago truncatula
Medtr0318s0020 5.0kb downstream 5.0kb downstream 6209 true scaffold0318: 14185-20393 Medicago truncatula
Medtr0318s0020 5.0kb downstream 5.0kb downstream 4223 false scaffold0318: 16171-20393 Medicago truncatula
Medtr0318s0020 10.0kb upstream 10.0kb upstream 11986 true scaffold0318: 4185-16170 Medicago truncatula
Medtr0318s0020 10.0kb upstream 10.0kb upstream 10000 false scaffold0318: 4185-14184 Medicago truncatula
Medtr0318s0020 10.0kb downstream 10.0kb downstream 6209 true scaffold0318: 14185-20393 Medicago truncatula
Medtr0318s0020 10.0kb downstream 10.0kb downstream 4223 false scaffold0318: 16171-20393 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302430 5265 Fabidae View MSA
124067622 5270 Rosid View MSA
123740922 5271 Pentapetalae View MSA
122785631 5272 Eudicot View MSA
122049619 5273 Angiosperm View MSA
121344351 5274 Embryophyte View MSA
123380027 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.157        
cufflinks 6.09        
cufflinks 5.004        
cufflinks 5.545        
cufflinks 7.058        
cufflinks 0.505       Low
cufflinks 3.807        
cufflinks 4.511        
cufflinks 4.67        

0 Strain