Gene : Medtr0316s0010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11655:SF14 - 54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL Description:  50S ribosomal protein L6
Genomic Order:  1 Name:  ? Medtr0316s0010
Secondary Identifier:  ? PAC:31101337
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr0316s0010 0.5kb upstream 0.5kb upstream 2866 true scaffold0316: 13192-16057 Medicago truncatula
Medtr0316s0010 0.5kb upstream 0.5kb upstream 500 false scaffold0316: 15558-16057 Medicago truncatula
Medtr0316s0010 0.5kb downstream 0.5kb downstream 2866 true scaffold0316: 12692-15557 Medicago truncatula
Medtr0316s0010 0.5kb downstream 0.5kb downstream 500 false scaffold0316: 12692-13191 Medicago truncatula
Medtr0316s0010 1.0kb upstream 1.0kb upstream 3366 true scaffold0316: 13192-16557 Medicago truncatula
Medtr0316s0010 1.0kb upstream 1.0kb upstream 1000 false scaffold0316: 15558-16557 Medicago truncatula
Medtr0316s0010 1.0kb downstream 1.0kb downstream 3366 true scaffold0316: 12192-15557 Medicago truncatula
Medtr0316s0010 1.0kb downstream 1.0kb downstream 1000 false scaffold0316: 12192-13191 Medicago truncatula
Medtr0316s0010 2.0kb upstream 2.0kb upstream 4366 true scaffold0316: 13192-17557 Medicago truncatula
Medtr0316s0010 2.0kb upstream 2.0kb upstream 2000 false scaffold0316: 15558-17557 Medicago truncatula
Medtr0316s0010 2.0kb downstream 2.0kb downstream 4366 true scaffold0316: 11192-15557 Medicago truncatula
Medtr0316s0010 2.0kb downstream 2.0kb downstream 2000 false scaffold0316: 11192-13191 Medicago truncatula
Medtr0316s0010 5.0kb upstream 5.0kb upstream 7254 true scaffold0316: 13192-20445 Medicago truncatula
Medtr0316s0010 5.0kb upstream 5.0kb upstream 4888 false scaffold0316: 15558-20445 Medicago truncatula
Medtr0316s0010 5.0kb downstream 5.0kb downstream 7366 true scaffold0316: 8192-15557 Medicago truncatula
Medtr0316s0010 5.0kb downstream 5.0kb downstream 5000 false scaffold0316: 8192-13191 Medicago truncatula
Medtr0316s0010 10.0kb upstream 10.0kb upstream 7254 true scaffold0316: 13192-20445 Medicago truncatula
Medtr0316s0010 10.0kb upstream 10.0kb upstream 4888 false scaffold0316: 15558-20445 Medicago truncatula
Medtr0316s0010 10.0kb downstream 10.0kb downstream 12366 true scaffold0316: 3192-15557 Medicago truncatula
Medtr0316s0010 10.0kb downstream 10.0kb downstream 10000 false scaffold0316: 3192-13191 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303745 5265 Fabidae View MSA
124063333 5270 Rosid View MSA
123740010 5271 Pentapetalae View MSA
122786185 5272 Eudicot View MSA
122045909 5273 Angiosperm View MSA
121344403 5274 Embryophyte View MSA
123424152 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.943       Low
cufflinks 81.39     High High
cufflinks 57.588     High  
cufflinks 2.13        
cufflinks 92.261     High High
cufflinks 1.251        
cufflinks 2.416        
cufflinks 89.804     High High
cufflinks 1.522        

0 Strain