Gene : SapurV1A.1238s0110 S. purpurea v1.0
Defline:  (1 of 3) K01703 - 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit (leuC) Genomic Order:  471
Name:  ? SapurV1A.1238s0110 Secondary Identifier:  ? PAC:31415621
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea BRANCHED-CHAIN-AA-SYN-PWY Salix purpurea pathologic  
Spurpurea LEUSYN-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1238s0110 0.5kb upstream 0.5kb upstream 6891 true chr10: 4245123-4252013 Salix purpurea
SapurV1A.1238s0110 0.5kb upstream 0.5kb upstream 500 false chr10: 4251514-4252013 Salix purpurea
SapurV1A.1238s0110 0.5kb downstream 0.5kb downstream 6891 true chr10: 4244623-4251513 Salix purpurea
SapurV1A.1238s0110 0.5kb downstream 0.5kb downstream 500 false chr10: 4244623-4245122 Salix purpurea
SapurV1A.1238s0110 1.0kb upstream 1.0kb upstream 7391 true chr10: 4245123-4252513 Salix purpurea
SapurV1A.1238s0110 1.0kb upstream 1.0kb upstream 1000 false chr10: 4251514-4252513 Salix purpurea
SapurV1A.1238s0110 1.0kb downstream 1.0kb downstream 7391 true chr10: 4244123-4251513 Salix purpurea
SapurV1A.1238s0110 1.0kb downstream 1.0kb downstream 1000 false chr10: 4244123-4245122 Salix purpurea
SapurV1A.1238s0110 2.0kb upstream 2.0kb upstream 8391 true chr10: 4245123-4253513 Salix purpurea
SapurV1A.1238s0110 2.0kb upstream 2.0kb upstream 2000 false chr10: 4251514-4253513 Salix purpurea
SapurV1A.1238s0110 2.0kb downstream 2.0kb downstream 8391 true chr10: 4243123-4251513 Salix purpurea
SapurV1A.1238s0110 2.0kb downstream 2.0kb downstream 2000 false chr10: 4243123-4245122 Salix purpurea
SapurV1A.1238s0110 5.0kb upstream 5.0kb upstream 11391 true chr10: 4245123-4256513 Salix purpurea
SapurV1A.1238s0110 5.0kb upstream 5.0kb upstream 5000 false chr10: 4251514-4256513 Salix purpurea
SapurV1A.1238s0110 5.0kb downstream 5.0kb downstream 11391 true chr10: 4240123-4251513 Salix purpurea
SapurV1A.1238s0110 5.0kb downstream 5.0kb downstream 5000 false chr10: 4240123-4245122 Salix purpurea
SapurV1A.1238s0110 10.0kb upstream 10.0kb upstream 16391 true chr10: 4245123-4261513 Salix purpurea
SapurV1A.1238s0110 10.0kb upstream 10.0kb upstream 10000 false chr10: 4251514-4261513 Salix purpurea
SapurV1A.1238s0110 10.0kb downstream 10.0kb downstream 16391 true chr10: 4235123-4251513 Salix purpurea
SapurV1A.1238s0110 10.0kb downstream 10.0kb downstream 10000 false chr10: 4235123-4245122 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461531 5262 Malpighiales View MSA
124238803 5268 Malvidae View MSA
124064281 5270 Rosid View MSA
123737905 5271 Pentapetalae View MSA
122792861 5272 Eudicot View MSA
122047334 5273 Angiosperm View MSA
121347218 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain