Gene : SapurV1A.0557s0060 S. purpurea v1.0

Defline:  (1 of 16) PF07145 - Ataxin-2 C-terminal region (PAM2) Genomic Order:  1337
Name:  ? SapurV1A.0557s0060 Secondary Identifier:  ? PAC:31414976

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0557s0060 0.5kb upstream 0.5kb upstream 2581 true chr10: 14140078-14142658 Salix purpurea
SapurV1A.0557s0060 0.5kb upstream 0.5kb upstream 500 false chr10: 14142159-14142658 Salix purpurea
SapurV1A.0557s0060 0.5kb downstream 0.5kb downstream 2581 true chr10: 14139578-14142158 Salix purpurea
SapurV1A.0557s0060 0.5kb downstream 0.5kb downstream 500 false chr10: 14139578-14140077 Salix purpurea
SapurV1A.0557s0060 1.0kb upstream 1.0kb upstream 3081 true chr10: 14140078-14143158 Salix purpurea
SapurV1A.0557s0060 1.0kb upstream 1.0kb upstream 1000 false chr10: 14142159-14143158 Salix purpurea
SapurV1A.0557s0060 1.0kb downstream 1.0kb downstream 3081 true chr10: 14139078-14142158 Salix purpurea
SapurV1A.0557s0060 1.0kb downstream 1.0kb downstream 1000 false chr10: 14139078-14140077 Salix purpurea
SapurV1A.0557s0060 2.0kb upstream 2.0kb upstream 4081 true chr10: 14140078-14144158 Salix purpurea
SapurV1A.0557s0060 2.0kb upstream 2.0kb upstream 2000 false chr10: 14142159-14144158 Salix purpurea
SapurV1A.0557s0060 2.0kb downstream 2.0kb downstream 4081 true chr10: 14138078-14142158 Salix purpurea
SapurV1A.0557s0060 2.0kb downstream 2.0kb downstream 2000 false chr10: 14138078-14140077 Salix purpurea
SapurV1A.0557s0060 5.0kb upstream 5.0kb upstream 7081 true chr10: 14140078-14147158 Salix purpurea
SapurV1A.0557s0060 5.0kb upstream 5.0kb upstream 5000 false chr10: 14142159-14147158 Salix purpurea
SapurV1A.0557s0060 5.0kb downstream 5.0kb downstream 7081 true chr10: 14135078-14142158 Salix purpurea
SapurV1A.0557s0060 5.0kb downstream 5.0kb downstream 5000 false chr10: 14135078-14140077 Salix purpurea
SapurV1A.0557s0060 10.0kb upstream 10.0kb upstream 12081 true chr10: 14140078-14152158 Salix purpurea
SapurV1A.0557s0060 10.0kb upstream 10.0kb upstream 10000 false chr10: 14142159-14152158 Salix purpurea
SapurV1A.0557s0060 10.0kb downstream 10.0kb downstream 12081 true chr10: 14130078-14142158 Salix purpurea
SapurV1A.0557s0060 10.0kb downstream 10.0kb downstream 10000 false chr10: 14130078-14140077 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455025 5262 Malpighiales View MSA
124252923 5268 Malvidae View MSA
124070675 5270 Rosid View MSA
123742369 5271 Pentapetalae View MSA
122796171 5272 Eudicot View MSA
122048247 5273 Angiosperm View MSA
121345899 5274 Embryophyte View MSA
123380287 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain