Gene : SapurV1A.0348s0100 S. purpurea v1.0
Defline:  (1 of 1) K01627 - 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) (kdsA) Genomic Order:  1355
Name:  ? SapurV1A.0348s0100 Secondary Identifier:  ? PAC:31429722
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-1269 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0348s0100 0.5kb upstream 0.5kb upstream 3006 true chr05: 17058380-17061385 Salix purpurea
SapurV1A.0348s0100 0.5kb upstream 0.5kb upstream 500 false chr05: 17060886-17061385 Salix purpurea
SapurV1A.0348s0100 0.5kb downstream 0.5kb downstream 3006 true chr05: 17057880-17060885 Salix purpurea
SapurV1A.0348s0100 0.5kb downstream 0.5kb downstream 500 false chr05: 17057880-17058379 Salix purpurea
SapurV1A.0348s0100 1.0kb upstream 1.0kb upstream 3506 true chr05: 17058380-17061885 Salix purpurea
SapurV1A.0348s0100 1.0kb upstream 1.0kb upstream 1000 false chr05: 17060886-17061885 Salix purpurea
SapurV1A.0348s0100 1.0kb downstream 1.0kb downstream 3506 true chr05: 17057380-17060885 Salix purpurea
SapurV1A.0348s0100 1.0kb downstream 1.0kb downstream 1000 false chr05: 17057380-17058379 Salix purpurea
SapurV1A.0348s0100 2.0kb upstream 2.0kb upstream 4506 true chr05: 17058380-17062885 Salix purpurea
SapurV1A.0348s0100 2.0kb upstream 2.0kb upstream 2000 false chr05: 17060886-17062885 Salix purpurea
SapurV1A.0348s0100 2.0kb downstream 2.0kb downstream 4506 true chr05: 17056380-17060885 Salix purpurea
SapurV1A.0348s0100 2.0kb downstream 2.0kb downstream 2000 false chr05: 17056380-17058379 Salix purpurea
SapurV1A.0348s0100 5.0kb upstream 5.0kb upstream 7506 true chr05: 17058380-17065885 Salix purpurea
SapurV1A.0348s0100 5.0kb upstream 5.0kb upstream 5000 false chr05: 17060886-17065885 Salix purpurea
SapurV1A.0348s0100 5.0kb downstream 5.0kb downstream 7506 true chr05: 17053380-17060885 Salix purpurea
SapurV1A.0348s0100 5.0kb downstream 5.0kb downstream 5000 false chr05: 17053380-17058379 Salix purpurea
SapurV1A.0348s0100 10.0kb upstream 10.0kb upstream 12506 true chr05: 17058380-17070885 Salix purpurea
SapurV1A.0348s0100 10.0kb upstream 10.0kb upstream 10000 false chr05: 17060886-17070885 Salix purpurea
SapurV1A.0348s0100 10.0kb downstream 10.0kb downstream 12506 true chr05: 17048380-17060885 Salix purpurea
SapurV1A.0348s0100 10.0kb downstream 10.0kb downstream 10000 false chr05: 17048380-17058379 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122411033 5262 Malpighiales View MSA
124244021 5268 Malvidae View MSA
124065016 5270 Rosid View MSA
123738710 5271 Pentapetalae View MSA
122788202 5272 Eudicot View MSA
122050140 5273 Angiosperm View MSA
121346522 5274 Embryophyte View MSA
123424720 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain