Gene : SapurV1A.0416s0120 S. purpurea v1.0
Defline:  (1 of 8) PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) Genomic Order:  649
Name:  ? SapurV1A.0416s0120 Secondary Identifier:  ? PAC:31395869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0416s0120 0.5kb upstream 0.5kb upstream 1848 true chr11: 9585958-9587805 Salix purpurea
SapurV1A.0416s0120 0.5kb upstream 0.5kb upstream 500 false chr11: 9587306-9587805 Salix purpurea
SapurV1A.0416s0120 0.5kb downstream 0.5kb downstream 1848 true chr11: 9585458-9587305 Salix purpurea
SapurV1A.0416s0120 0.5kb downstream 0.5kb downstream 500 false chr11: 9585458-9585957 Salix purpurea
SapurV1A.0416s0120 1.0kb upstream 1.0kb upstream 2348 true chr11: 9585958-9588305 Salix purpurea
SapurV1A.0416s0120 1.0kb upstream 1.0kb upstream 1000 false chr11: 9587306-9588305 Salix purpurea
SapurV1A.0416s0120 1.0kb downstream 1.0kb downstream 2348 true chr11: 9584958-9587305 Salix purpurea
SapurV1A.0416s0120 1.0kb downstream 1.0kb downstream 1000 false chr11: 9584958-9585957 Salix purpurea
SapurV1A.0416s0120 2.0kb upstream 2.0kb upstream 3348 true chr11: 9585958-9589305 Salix purpurea
SapurV1A.0416s0120 2.0kb upstream 2.0kb upstream 2000 false chr11: 9587306-9589305 Salix purpurea
SapurV1A.0416s0120 2.0kb downstream 2.0kb downstream 3348 true chr11: 9583958-9587305 Salix purpurea
SapurV1A.0416s0120 2.0kb downstream 2.0kb downstream 2000 false chr11: 9583958-9585957 Salix purpurea
SapurV1A.0416s0120 5.0kb upstream 5.0kb upstream 6348 true chr11: 9585958-9592305 Salix purpurea
SapurV1A.0416s0120 5.0kb upstream 5.0kb upstream 5000 false chr11: 9587306-9592305 Salix purpurea
SapurV1A.0416s0120 5.0kb downstream 5.0kb downstream 6348 true chr11: 9580958-9587305 Salix purpurea
SapurV1A.0416s0120 5.0kb downstream 5.0kb downstream 5000 false chr11: 9580958-9585957 Salix purpurea
SapurV1A.0416s0120 10.0kb upstream 10.0kb upstream 11348 true chr11: 9585958-9597305 Salix purpurea
SapurV1A.0416s0120 10.0kb upstream 10.0kb upstream 10000 false chr11: 9587306-9597305 Salix purpurea
SapurV1A.0416s0120 10.0kb downstream 10.0kb downstream 11348 true chr11: 9575958-9587305 Salix purpurea
SapurV1A.0416s0120 10.0kb downstream 10.0kb downstream 10000 false chr11: 9575958-9585957 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426544 5262 Malpighiales View MSA
124248769 5268 Malvidae View MSA
124074284 5270 Rosid View MSA
123751462 5271 Pentapetalae View MSA
122795351 5272 Eudicot View MSA
122048962 5273 Angiosperm View MSA
121311190 5274 Embryophyte View MSA
123348519 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain