Gene : SapurV1A.2016s0020 S. purpurea v1.0
Defline:  (1 of 3) PTHR31642//PTHR31642:SF40 - FAMILY NOT NAMED // DUAL TRANSCRIPTION UNIT AND ALTERNATIVE SPLICING PROTEIN GLAUCE Genomic Order:  1307
Name:  ? SapurV1A.2016s0020 Secondary Identifier:  ? PAC:31413194
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-7120 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2016s0020 0.5kb upstream 0.5kb upstream 2955 true chr10: 13901692-13904646 Salix purpurea
SapurV1A.2016s0020 0.5kb upstream 0.5kb upstream 500 false chr10: 13904147-13904646 Salix purpurea
SapurV1A.2016s0020 0.5kb downstream 0.5kb downstream 2955 true chr10: 13901192-13904146 Salix purpurea
SapurV1A.2016s0020 0.5kb downstream 0.5kb downstream 500 false chr10: 13901192-13901691 Salix purpurea
SapurV1A.2016s0020 1.0kb upstream 1.0kb upstream 3455 true chr10: 13901692-13905146 Salix purpurea
SapurV1A.2016s0020 1.0kb upstream 1.0kb upstream 1000 false chr10: 13904147-13905146 Salix purpurea
SapurV1A.2016s0020 1.0kb downstream 1.0kb downstream 3455 true chr10: 13900692-13904146 Salix purpurea
SapurV1A.2016s0020 1.0kb downstream 1.0kb downstream 1000 false chr10: 13900692-13901691 Salix purpurea
SapurV1A.2016s0020 2.0kb upstream 2.0kb upstream 4455 true chr10: 13901692-13906146 Salix purpurea
SapurV1A.2016s0020 2.0kb upstream 2.0kb upstream 2000 false chr10: 13904147-13906146 Salix purpurea
SapurV1A.2016s0020 2.0kb downstream 2.0kb downstream 4455 true chr10: 13899692-13904146 Salix purpurea
SapurV1A.2016s0020 2.0kb downstream 2.0kb downstream 2000 false chr10: 13899692-13901691 Salix purpurea
SapurV1A.2016s0020 5.0kb upstream 5.0kb upstream 7455 true chr10: 13901692-13909146 Salix purpurea
SapurV1A.2016s0020 5.0kb upstream 5.0kb upstream 5000 false chr10: 13904147-13909146 Salix purpurea
SapurV1A.2016s0020 5.0kb downstream 5.0kb downstream 7455 true chr10: 13896692-13904146 Salix purpurea
SapurV1A.2016s0020 5.0kb downstream 5.0kb downstream 5000 false chr10: 13896692-13901691 Salix purpurea
SapurV1A.2016s0020 10.0kb upstream 10.0kb upstream 12455 true chr10: 13901692-13914146 Salix purpurea
SapurV1A.2016s0020 10.0kb upstream 10.0kb upstream 10000 false chr10: 13904147-13914146 Salix purpurea
SapurV1A.2016s0020 10.0kb downstream 10.0kb downstream 12455 true chr10: 13891692-13904146 Salix purpurea
SapurV1A.2016s0020 10.0kb downstream 10.0kb downstream 10000 false chr10: 13891692-13901691 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457469 5262 Malpighiales View MSA
124243245 5268 Malvidae View MSA
124063642 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain