Gene : SapurV1A.0268s0350 S. purpurea v1.0

Defline:  (1 of 11) PF07899 - Frigida-like protein (Frigida) Genomic Order:  1092
Name:  ? SapurV1A.0268s0350 Secondary Identifier:  ? PAC:31431194

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0268s0350 0.5kb upstream 0.5kb upstream 4567 true chr15: 20551071-20555637 Salix purpurea
SapurV1A.0268s0350 0.5kb upstream 0.5kb upstream 500 false chr15: 20551071-20551570 Salix purpurea
SapurV1A.0268s0350 0.5kb downstream 0.5kb downstream 4567 true chr15: 20551571-20556137 Salix purpurea
SapurV1A.0268s0350 0.5kb downstream 0.5kb downstream 500 false chr15: 20555638-20556137 Salix purpurea
SapurV1A.0268s0350 1.0kb upstream 1.0kb upstream 5067 true chr15: 20550571-20555637 Salix purpurea
SapurV1A.0268s0350 1.0kb upstream 1.0kb upstream 1000 false chr15: 20550571-20551570 Salix purpurea
SapurV1A.0268s0350 1.0kb downstream 1.0kb downstream 5067 true chr15: 20551571-20556637 Salix purpurea
SapurV1A.0268s0350 1.0kb downstream 1.0kb downstream 1000 false chr15: 20555638-20556637 Salix purpurea
SapurV1A.0268s0350 2.0kb upstream 2.0kb upstream 6067 true chr15: 20549571-20555637 Salix purpurea
SapurV1A.0268s0350 2.0kb upstream 2.0kb upstream 2000 false chr15: 20549571-20551570 Salix purpurea
SapurV1A.0268s0350 2.0kb downstream 2.0kb downstream 6067 true chr15: 20551571-20557637 Salix purpurea
SapurV1A.0268s0350 2.0kb downstream 2.0kb downstream 2000 false chr15: 20555638-20557637 Salix purpurea
SapurV1A.0268s0350 5.0kb upstream 5.0kb upstream 9067 true chr15: 20546571-20555637 Salix purpurea
SapurV1A.0268s0350 5.0kb upstream 5.0kb upstream 5000 false chr15: 20546571-20551570 Salix purpurea
SapurV1A.0268s0350 5.0kb downstream 5.0kb downstream 9067 true chr15: 20551571-20560637 Salix purpurea
SapurV1A.0268s0350 5.0kb downstream 5.0kb downstream 5000 false chr15: 20555638-20560637 Salix purpurea
SapurV1A.0268s0350 10.0kb upstream 10.0kb upstream 14067 true chr15: 20541571-20555637 Salix purpurea
SapurV1A.0268s0350 10.0kb upstream 10.0kb upstream 10000 false chr15: 20541571-20551570 Salix purpurea
SapurV1A.0268s0350 10.0kb downstream 10.0kb downstream 14067 true chr15: 20551571-20565637 Salix purpurea
SapurV1A.0268s0350 10.0kb downstream 10.0kb downstream 10000 false chr15: 20555638-20565637 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454000 5262 Malpighiales View MSA
124251092 5268 Malvidae View MSA
124068332 5270 Rosid View MSA
123746109 5271 Pentapetalae View MSA
122785719 5272 Eudicot View MSA
122043307 5273 Angiosperm View MSA
121310105 5274 Embryophyte View MSA
123347687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain