Gene : SapurV1A.0456s0060 S. purpurea v1.0
Defline:  (1 of 1) PTHR32098:SF5 - LYCOPENE BETA/EPSILON CYCLASE PROTEIN Genomic Order:  1231
Name:  ? SapurV1A.0456s0060 Secondary Identifier:  ? PAC:31431836
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea CAROTENOID-PWY Salix purpurea pathologic  
Spurpurea PWY-5943 Salix purpurea pathologic  
Spurpurea PWY-5947 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0456s0060 0.5kb upstream 0.5kb upstream 9281 true chr15: 21676013-21685293 Salix purpurea
SapurV1A.0456s0060 0.5kb upstream 0.5kb upstream 500 false chr15: 21676013-21676512 Salix purpurea
SapurV1A.0456s0060 0.5kb downstream 0.5kb downstream 9281 true chr15: 21676513-21685793 Salix purpurea
SapurV1A.0456s0060 0.5kb downstream 0.5kb downstream 500 false chr15: 21685294-21685793 Salix purpurea
SapurV1A.0456s0060 1.0kb upstream 1.0kb upstream 9781 true chr15: 21675513-21685293 Salix purpurea
SapurV1A.0456s0060 1.0kb upstream 1.0kb upstream 1000 false chr15: 21675513-21676512 Salix purpurea
SapurV1A.0456s0060 1.0kb downstream 1.0kb downstream 9781 true chr15: 21676513-21686293 Salix purpurea
SapurV1A.0456s0060 1.0kb downstream 1.0kb downstream 1000 false chr15: 21685294-21686293 Salix purpurea
SapurV1A.0456s0060 2.0kb upstream 2.0kb upstream 10781 true chr15: 21674513-21685293 Salix purpurea
SapurV1A.0456s0060 2.0kb upstream 2.0kb upstream 2000 false chr15: 21674513-21676512 Salix purpurea
SapurV1A.0456s0060 2.0kb downstream 2.0kb downstream 10781 true chr15: 21676513-21687293 Salix purpurea
SapurV1A.0456s0060 2.0kb downstream 2.0kb downstream 2000 false chr15: 21685294-21687293 Salix purpurea
SapurV1A.0456s0060 5.0kb upstream 5.0kb upstream 13781 true chr15: 21671513-21685293 Salix purpurea
SapurV1A.0456s0060 5.0kb upstream 5.0kb upstream 5000 false chr15: 21671513-21676512 Salix purpurea
SapurV1A.0456s0060 5.0kb downstream 5.0kb downstream 13781 true chr15: 21676513-21690293 Salix purpurea
SapurV1A.0456s0060 5.0kb downstream 5.0kb downstream 5000 false chr15: 21685294-21690293 Salix purpurea
SapurV1A.0456s0060 10.0kb upstream 10.0kb upstream 18781 true chr15: 21666513-21685293 Salix purpurea
SapurV1A.0456s0060 10.0kb upstream 10.0kb upstream 10000 false chr15: 21666513-21676512 Salix purpurea
SapurV1A.0456s0060 10.0kb downstream 10.0kb downstream 18781 true chr15: 21676513-21695293 Salix purpurea
SapurV1A.0456s0060 10.0kb downstream 10.0kb downstream 10000 false chr15: 21685294-21695293 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457322 5262 Malpighiales View MSA
124238742 5268 Malvidae View MSA
124061081 5270 Rosid View MSA
123739346 5271 Pentapetalae View MSA
122787287 5272 Eudicot View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain