Gene : SapurV1A.1003s0050 S. purpurea v1.0

Defline:  (1 of 2) K14403 - cleavage and polyadenylation specificity factor subunit 3 (CPSF3, YSH1) Genomic Order:  496
Name:  ? SapurV1A.1003s0050 Secondary Identifier:  ? PAC:31449060

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1003s0050 0.5kb upstream 0.5kb upstream 5431 true chr17: 9908316-9913746 Salix purpurea
SapurV1A.1003s0050 0.5kb upstream 0.5kb upstream 500 false chr17: 9913247-9913746 Salix purpurea
SapurV1A.1003s0050 0.5kb downstream 0.5kb downstream 5431 true chr17: 9907816-9913246 Salix purpurea
SapurV1A.1003s0050 0.5kb downstream 0.5kb downstream 500 false chr17: 9907816-9908315 Salix purpurea
SapurV1A.1003s0050 1.0kb upstream 1.0kb upstream 5931 true chr17: 9908316-9914246 Salix purpurea
SapurV1A.1003s0050 1.0kb upstream 1.0kb upstream 1000 false chr17: 9913247-9914246 Salix purpurea
SapurV1A.1003s0050 1.0kb downstream 1.0kb downstream 5931 true chr17: 9907316-9913246 Salix purpurea
SapurV1A.1003s0050 1.0kb downstream 1.0kb downstream 1000 false chr17: 9907316-9908315 Salix purpurea
SapurV1A.1003s0050 2.0kb upstream 2.0kb upstream 6931 true chr17: 9908316-9915246 Salix purpurea
SapurV1A.1003s0050 2.0kb upstream 2.0kb upstream 2000 false chr17: 9913247-9915246 Salix purpurea
SapurV1A.1003s0050 2.0kb downstream 2.0kb downstream 6931 true chr17: 9906316-9913246 Salix purpurea
SapurV1A.1003s0050 2.0kb downstream 2.0kb downstream 2000 false chr17: 9906316-9908315 Salix purpurea
SapurV1A.1003s0050 5.0kb upstream 5.0kb upstream 9931 true chr17: 9908316-9918246 Salix purpurea
SapurV1A.1003s0050 5.0kb upstream 5.0kb upstream 5000 false chr17: 9913247-9918246 Salix purpurea
SapurV1A.1003s0050 5.0kb downstream 5.0kb downstream 9931 true chr17: 9903316-9913246 Salix purpurea
SapurV1A.1003s0050 5.0kb downstream 5.0kb downstream 5000 false chr17: 9903316-9908315 Salix purpurea
SapurV1A.1003s0050 10.0kb upstream 10.0kb upstream 14931 true chr17: 9908316-9923246 Salix purpurea
SapurV1A.1003s0050 10.0kb upstream 10.0kb upstream 10000 false chr17: 9913247-9923246 Salix purpurea
SapurV1A.1003s0050 10.0kb downstream 10.0kb downstream 14931 true chr17: 9898316-9913246 Salix purpurea
SapurV1A.1003s0050 10.0kb downstream 10.0kb downstream 10000 false chr17: 9898316-9908315 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454094 5262 Malpighiales View MSA
124240233 5268 Malvidae View MSA
124069144 5270 Rosid View MSA
123737770 5271 Pentapetalae View MSA
122787624 5272 Eudicot View MSA
122043223 5273 Angiosperm View MSA
121344994 5274 Embryophyte View MSA
123426215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain