Gene : SapurV1A.0549s0100 S. purpurea v1.0
Defline:  (1 of 1) PTHR31480//PTHR31480:SF2 - FAMILY NOT NAMED // PHYTOENE SYNTHASE, CHLOROPLASTIC Genomic Order:  1009
Name:  ? SapurV1A.0549s0100 Secondary Identifier:  ? PAC:31448183
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea CAROTENOID-PWY Salix purpurea pathologic  
Spurpurea PWY-6475 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0549s0100 0.5kb upstream 0.5kb upstream 4677 true chr17: 16798169-16802845 Salix purpurea
SapurV1A.0549s0100 0.5kb upstream 0.5kb upstream 500 false chr17: 16802346-16802845 Salix purpurea
SapurV1A.0549s0100 0.5kb downstream 0.5kb downstream 4677 true chr17: 16797669-16802345 Salix purpurea
SapurV1A.0549s0100 0.5kb downstream 0.5kb downstream 500 false chr17: 16797669-16798168 Salix purpurea
SapurV1A.0549s0100 1.0kb upstream 1.0kb upstream 5177 true chr17: 16798169-16803345 Salix purpurea
SapurV1A.0549s0100 1.0kb upstream 1.0kb upstream 1000 false chr17: 16802346-16803345 Salix purpurea
SapurV1A.0549s0100 1.0kb downstream 1.0kb downstream 5177 true chr17: 16797169-16802345 Salix purpurea
SapurV1A.0549s0100 1.0kb downstream 1.0kb downstream 1000 false chr17: 16797169-16798168 Salix purpurea
SapurV1A.0549s0100 2.0kb upstream 2.0kb upstream 6177 true chr17: 16798169-16804345 Salix purpurea
SapurV1A.0549s0100 2.0kb upstream 2.0kb upstream 2000 false chr17: 16802346-16804345 Salix purpurea
SapurV1A.0549s0100 2.0kb downstream 2.0kb downstream 6177 true chr17: 16796169-16802345 Salix purpurea
SapurV1A.0549s0100 2.0kb downstream 2.0kb downstream 2000 false chr17: 16796169-16798168 Salix purpurea
SapurV1A.0549s0100 5.0kb upstream 5.0kb upstream 9177 true chr17: 16798169-16807345 Salix purpurea
SapurV1A.0549s0100 5.0kb upstream 5.0kb upstream 5000 false chr17: 16802346-16807345 Salix purpurea
SapurV1A.0549s0100 5.0kb downstream 5.0kb downstream 9177 true chr17: 16793169-16802345 Salix purpurea
SapurV1A.0549s0100 5.0kb downstream 5.0kb downstream 5000 false chr17: 16793169-16798168 Salix purpurea
SapurV1A.0549s0100 10.0kb upstream 10.0kb upstream 14177 true chr17: 16798169-16812345 Salix purpurea
SapurV1A.0549s0100 10.0kb upstream 10.0kb upstream 10000 false chr17: 16802346-16812345 Salix purpurea
SapurV1A.0549s0100 10.0kb downstream 10.0kb downstream 14177 true chr17: 16788169-16802345 Salix purpurea
SapurV1A.0549s0100 10.0kb downstream 10.0kb downstream 10000 false chr17: 16788169-16798168 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122463216 5262 Malpighiales View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain