Gene : SapurV1A.0452s0120 S. purpurea v1.0
Defline:  (1 of 1) PF01485//PF13923 - IBR domain, a half RING-finger domain (IBR) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_2) Genomic Order:  167
Name:  ? SapurV1A.0452s0120 Secondary Identifier:  ? PAC:31447909
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-7511 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0452s0120 0.5kb upstream 0.5kb upstream 9767 true chr17: 2133002-2142768 Salix purpurea
SapurV1A.0452s0120 0.5kb upstream 0.5kb upstream 500 false chr17: 2142269-2142768 Salix purpurea
SapurV1A.0452s0120 0.5kb downstream 0.5kb downstream 9767 true chr17: 2132502-2142268 Salix purpurea
SapurV1A.0452s0120 0.5kb downstream 0.5kb downstream 500 false chr17: 2132502-2133001 Salix purpurea
SapurV1A.0452s0120 1.0kb upstream 1.0kb upstream 10267 true chr17: 2133002-2143268 Salix purpurea
SapurV1A.0452s0120 1.0kb upstream 1.0kb upstream 1000 false chr17: 2142269-2143268 Salix purpurea
SapurV1A.0452s0120 1.0kb downstream 1.0kb downstream 10267 true chr17: 2132002-2142268 Salix purpurea
SapurV1A.0452s0120 1.0kb downstream 1.0kb downstream 1000 false chr17: 2132002-2133001 Salix purpurea
SapurV1A.0452s0120 2.0kb upstream 2.0kb upstream 11267 true chr17: 2133002-2144268 Salix purpurea
SapurV1A.0452s0120 2.0kb upstream 2.0kb upstream 2000 false chr17: 2142269-2144268 Salix purpurea
SapurV1A.0452s0120 2.0kb downstream 2.0kb downstream 11267 true chr17: 2131002-2142268 Salix purpurea
SapurV1A.0452s0120 2.0kb downstream 2.0kb downstream 2000 false chr17: 2131002-2133001 Salix purpurea
SapurV1A.0452s0120 5.0kb upstream 5.0kb upstream 14267 true chr17: 2133002-2147268 Salix purpurea
SapurV1A.0452s0120 5.0kb upstream 5.0kb upstream 5000 false chr17: 2142269-2147268 Salix purpurea
SapurV1A.0452s0120 5.0kb downstream 5.0kb downstream 14267 true chr17: 2128002-2142268 Salix purpurea
SapurV1A.0452s0120 5.0kb downstream 5.0kb downstream 5000 false chr17: 2128002-2133001 Salix purpurea
SapurV1A.0452s0120 10.0kb upstream 10.0kb upstream 19267 true chr17: 2133002-2152268 Salix purpurea
SapurV1A.0452s0120 10.0kb upstream 10.0kb upstream 10000 false chr17: 2142269-2152268 Salix purpurea
SapurV1A.0452s0120 10.0kb downstream 10.0kb downstream 19267 true chr17: 2123002-2142268 Salix purpurea
SapurV1A.0452s0120 10.0kb downstream 10.0kb downstream 10000 false chr17: 2123002-2133001 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450480 5262 Malpighiales View MSA
124248365 5268 Malvidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain