Gene : SapurV1A.0368s0200 S. purpurea v1.0
Defline:  (1 of 6) K01184 - polygalacturonase (E3.2.1.15) Genomic Order:  23
Name:  ? SapurV1A.0368s0200 Secondary Identifier:  ? PAC:31447615
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-1081 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0368s0200 0.5kb upstream 0.5kb upstream 2000 true chr17: 260441-262440 Salix purpurea
SapurV1A.0368s0200 0.5kb upstream 0.5kb upstream 500 false chr17: 261941-262440 Salix purpurea
SapurV1A.0368s0200 0.5kb downstream 0.5kb downstream 2000 true chr17: 259941-261940 Salix purpurea
SapurV1A.0368s0200 0.5kb downstream 0.5kb downstream 500 false chr17: 259941-260440 Salix purpurea
SapurV1A.0368s0200 1.0kb upstream 1.0kb upstream 2500 true chr17: 260441-262940 Salix purpurea
SapurV1A.0368s0200 1.0kb upstream 1.0kb upstream 1000 false chr17: 261941-262940 Salix purpurea
SapurV1A.0368s0200 1.0kb downstream 1.0kb downstream 2500 true chr17: 259441-261940 Salix purpurea
SapurV1A.0368s0200 1.0kb downstream 1.0kb downstream 1000 false chr17: 259441-260440 Salix purpurea
SapurV1A.0368s0200 2.0kb upstream 2.0kb upstream 3500 true chr17: 260441-263940 Salix purpurea
SapurV1A.0368s0200 2.0kb upstream 2.0kb upstream 2000 false chr17: 261941-263940 Salix purpurea
SapurV1A.0368s0200 2.0kb downstream 2.0kb downstream 3500 true chr17: 258441-261940 Salix purpurea
SapurV1A.0368s0200 2.0kb downstream 2.0kb downstream 2000 false chr17: 258441-260440 Salix purpurea
SapurV1A.0368s0200 5.0kb upstream 5.0kb upstream 6500 true chr17: 260441-266940 Salix purpurea
SapurV1A.0368s0200 5.0kb upstream 5.0kb upstream 5000 false chr17: 261941-266940 Salix purpurea
SapurV1A.0368s0200 5.0kb downstream 5.0kb downstream 6500 true chr17: 255441-261940 Salix purpurea
SapurV1A.0368s0200 5.0kb downstream 5.0kb downstream 5000 false chr17: 255441-260440 Salix purpurea
SapurV1A.0368s0200 10.0kb upstream 10.0kb upstream 11500 true chr17: 260441-271940 Salix purpurea
SapurV1A.0368s0200 10.0kb upstream 10.0kb upstream 10000 false chr17: 261941-271940 Salix purpurea
SapurV1A.0368s0200 10.0kb downstream 10.0kb downstream 11500 true chr17: 250441-261940 Salix purpurea
SapurV1A.0368s0200 10.0kb downstream 10.0kb downstream 10000 false chr17: 250441-260440 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448227 5262 Malpighiales View MSA
124252972 5268 Malvidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain