Gene : SapurV1A.0105s0150 S. purpurea v1.0
Defline:  (1 of 1) PTHR31423//PTHR31423:SF3 - FAMILY NOT NAMED // PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  15
Name:  ? SapurV1A.0105s0150 Secondary Identifier:  ? PAC:31423081
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea TRNA-CHARGING-PWY Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0105s0150 0.5kb upstream 0.5kb upstream 5163 true Scaffold0105: 152839-158001 Salix purpurea
SapurV1A.0105s0150 0.5kb upstream 0.5kb upstream 500 false Scaffold0105: 157502-158001 Salix purpurea
SapurV1A.0105s0150 0.5kb downstream 0.5kb downstream 5163 true Scaffold0105: 152339-157501 Salix purpurea
SapurV1A.0105s0150 0.5kb downstream 0.5kb downstream 500 false Scaffold0105: 152339-152838 Salix purpurea
SapurV1A.0105s0150 1.0kb upstream 1.0kb upstream 5663 true Scaffold0105: 152839-158501 Salix purpurea
SapurV1A.0105s0150 1.0kb upstream 1.0kb upstream 1000 false Scaffold0105: 157502-158501 Salix purpurea
SapurV1A.0105s0150 1.0kb downstream 1.0kb downstream 5663 true Scaffold0105: 151839-157501 Salix purpurea
SapurV1A.0105s0150 1.0kb downstream 1.0kb downstream 1000 false Scaffold0105: 151839-152838 Salix purpurea
SapurV1A.0105s0150 2.0kb upstream 2.0kb upstream 6663 true Scaffold0105: 152839-159501 Salix purpurea
SapurV1A.0105s0150 2.0kb upstream 2.0kb upstream 2000 false Scaffold0105: 157502-159501 Salix purpurea
SapurV1A.0105s0150 2.0kb downstream 2.0kb downstream 6663 true Scaffold0105: 150839-157501 Salix purpurea
SapurV1A.0105s0150 2.0kb downstream 2.0kb downstream 2000 false Scaffold0105: 150839-152838 Salix purpurea
SapurV1A.0105s0150 5.0kb upstream 5.0kb upstream 9663 true Scaffold0105: 152839-162501 Salix purpurea
SapurV1A.0105s0150 5.0kb upstream 5.0kb upstream 5000 false Scaffold0105: 157502-162501 Salix purpurea
SapurV1A.0105s0150 5.0kb downstream 5.0kb downstream 9663 true Scaffold0105: 147839-157501 Salix purpurea
SapurV1A.0105s0150 5.0kb downstream 5.0kb downstream 5000 false Scaffold0105: 147839-152838 Salix purpurea
SapurV1A.0105s0150 10.0kb upstream 10.0kb upstream 14663 true Scaffold0105: 152839-167501 Salix purpurea
SapurV1A.0105s0150 10.0kb upstream 10.0kb upstream 10000 false Scaffold0105: 157502-167501 Salix purpurea
SapurV1A.0105s0150 10.0kb downstream 10.0kb downstream 14663 true Scaffold0105: 142839-157501 Salix purpurea
SapurV1A.0105s0150 10.0kb downstream 10.0kb downstream 10000 false Scaffold0105: 142839-152838 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453510 5262 Malpighiales View MSA
124237844 5268 Malvidae View MSA
124062922 5270 Rosid View MSA
123736377 5271 Pentapetalae View MSA
122789736 5272 Eudicot View MSA
122045268 5273 Angiosperm View MSA
121348045 5274 Embryophyte View MSA
123425543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain