Gene : SapurV1A.1005s0030 S. purpurea v1.0
Defline:  (1 of 1) K02109//K02262 - F-type H+-transporting ATPase subunit b (ATPF0B, atpF) // cytochrome c oxidase subunit 3 (COX3) Genomic Order:  3
Name:  ? SapurV1A.1005s0030 Secondary Identifier:  ? PAC:31423345
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-6126 Salix purpurea pathologic  
Spurpurea PWY-7219 Salix purpurea pathologic  
Spurpurea PWY-7229 Salix purpurea pathologic  
Spurpurea PWY-841 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1005s0030 0.5kb upstream 0.5kb upstream 1364 true chr19: 52035-53398 Salix purpurea
SapurV1A.1005s0030 0.5kb upstream 0.5kb upstream 500 false chr19: 52899-53398 Salix purpurea
SapurV1A.1005s0030 0.5kb downstream 0.5kb downstream 1364 true chr19: 51535-52898 Salix purpurea
SapurV1A.1005s0030 0.5kb downstream 0.5kb downstream 500 false chr19: 51535-52034 Salix purpurea
SapurV1A.1005s0030 1.0kb upstream 1.0kb upstream 1864 true chr19: 52035-53898 Salix purpurea
SapurV1A.1005s0030 1.0kb upstream 1.0kb upstream 1000 false chr19: 52899-53898 Salix purpurea
SapurV1A.1005s0030 1.0kb downstream 1.0kb downstream 1864 true chr19: 51035-52898 Salix purpurea
SapurV1A.1005s0030 1.0kb downstream 1.0kb downstream 1000 false chr19: 51035-52034 Salix purpurea
SapurV1A.1005s0030 2.0kb upstream 2.0kb upstream 2864 true chr19: 52035-54898 Salix purpurea
SapurV1A.1005s0030 2.0kb upstream 2.0kb upstream 2000 false chr19: 52899-54898 Salix purpurea
SapurV1A.1005s0030 2.0kb downstream 2.0kb downstream 2864 true chr19: 50035-52898 Salix purpurea
SapurV1A.1005s0030 2.0kb downstream 2.0kb downstream 2000 false chr19: 50035-52034 Salix purpurea
SapurV1A.1005s0030 5.0kb upstream 5.0kb upstream 5864 true chr19: 52035-57898 Salix purpurea
SapurV1A.1005s0030 5.0kb upstream 5.0kb upstream 5000 false chr19: 52899-57898 Salix purpurea
SapurV1A.1005s0030 5.0kb downstream 5.0kb downstream 5864 true chr19: 47035-52898 Salix purpurea
SapurV1A.1005s0030 5.0kb downstream 5.0kb downstream 5000 false chr19: 47035-52034 Salix purpurea
SapurV1A.1005s0030 10.0kb upstream 10.0kb upstream 10864 true chr19: 52035-62898 Salix purpurea
SapurV1A.1005s0030 10.0kb upstream 10.0kb upstream 10000 false chr19: 52899-62898 Salix purpurea
SapurV1A.1005s0030 10.0kb downstream 10.0kb downstream 10864 true chr19: 42035-52898 Salix purpurea
SapurV1A.1005s0030 10.0kb downstream 10.0kb downstream 10000 false chr19: 42035-52034 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028540 5273 Angiosperm View MSA
122406983 5262 Malpighiales Singleton cluster - no MSA
124202494 5268 Malvidae Singleton cluster - no MSA
124072094 5270 Rosid View MSA
123742856 5271 Pentapetalae View MSA
122795419 5272 Eudicot View MSA
121348300 5274 Embryophyte View MSA
123380809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain