Gene : SapurV1A.0338s0260 S. purpurea v1.0
Defline:  (1 of 1) PTHR13711//PTHR13711:SF202//PTHR22970 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // HIGH MOBILITY GROUP B PROTEIN 10-RELATED // FAMILY NOT NAMED Genomic Order:  26
Name:  ? SapurV1A.0338s0260 Secondary Identifier:  ? PAC:31455299
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0338s0260 0.5kb upstream 0.5kb upstream 4400 true Scaffold0338: 154853-159252 Salix purpurea
SapurV1A.0338s0260 0.5kb upstream 0.5kb upstream 500 false Scaffold0338: 154853-155352 Salix purpurea
SapurV1A.0338s0260 0.5kb downstream 0.5kb downstream 4400 true Scaffold0338: 155353-159752 Salix purpurea
SapurV1A.0338s0260 0.5kb downstream 0.5kb downstream 500 false Scaffold0338: 159253-159752 Salix purpurea
SapurV1A.0338s0260 1.0kb upstream 1.0kb upstream 4900 true Scaffold0338: 154353-159252 Salix purpurea
SapurV1A.0338s0260 1.0kb upstream 1.0kb upstream 1000 false Scaffold0338: 154353-155352 Salix purpurea
SapurV1A.0338s0260 1.0kb downstream 1.0kb downstream 4900 true Scaffold0338: 155353-160252 Salix purpurea
SapurV1A.0338s0260 1.0kb downstream 1.0kb downstream 1000 false Scaffold0338: 159253-160252 Salix purpurea
SapurV1A.0338s0260 2.0kb upstream 2.0kb upstream 5900 true Scaffold0338: 153353-159252 Salix purpurea
SapurV1A.0338s0260 2.0kb upstream 2.0kb upstream 2000 false Scaffold0338: 153353-155352 Salix purpurea
SapurV1A.0338s0260 2.0kb downstream 2.0kb downstream 5900 true Scaffold0338: 155353-161252 Salix purpurea
SapurV1A.0338s0260 2.0kb downstream 2.0kb downstream 2000 false Scaffold0338: 159253-161252 Salix purpurea
SapurV1A.0338s0260 5.0kb upstream 5.0kb upstream 8900 true Scaffold0338: 150353-159252 Salix purpurea
SapurV1A.0338s0260 5.0kb upstream 5.0kb upstream 5000 false Scaffold0338: 150353-155352 Salix purpurea
SapurV1A.0338s0260 5.0kb downstream 5.0kb downstream 8900 true Scaffold0338: 155353-164252 Salix purpurea
SapurV1A.0338s0260 5.0kb downstream 5.0kb downstream 5000 false Scaffold0338: 159253-164252 Salix purpurea
SapurV1A.0338s0260 10.0kb upstream 10.0kb upstream 13900 true Scaffold0338: 145353-159252 Salix purpurea
SapurV1A.0338s0260 10.0kb upstream 10.0kb upstream 10000 false Scaffold0338: 145353-155352 Salix purpurea
SapurV1A.0338s0260 10.0kb downstream 10.0kb downstream 13900 true Scaffold0338: 155353-169252 Salix purpurea
SapurV1A.0338s0260 10.0kb downstream 10.0kb downstream 10000 false Scaffold0338: 159253-169252 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462464 5262 Malpighiales View MSA
124240999 5268 Malvidae View MSA
124066815 5270 Rosid View MSA
123749147 5271 Pentapetalae View MSA
122792446 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain