Gene : SapurV1A.0345s0230 S. purpurea v1.0

Defline:  (1 of 2) K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Genomic Order:  23
Name:  ? SapurV1A.0345s0230 Secondary Identifier:  ? PAC:31440708

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0345s0230 0.5kb upstream 0.5kb upstream 7995 true Scaffold0345: 147683-155677 Salix purpurea
SapurV1A.0345s0230 0.5kb upstream 0.5kb upstream 500 false Scaffold0345: 147683-148182 Salix purpurea
SapurV1A.0345s0230 0.5kb downstream 0.5kb downstream 7995 true Scaffold0345: 148183-156177 Salix purpurea
SapurV1A.0345s0230 0.5kb downstream 0.5kb downstream 500 false Scaffold0345: 155678-156177 Salix purpurea
SapurV1A.0345s0230 1.0kb upstream 1.0kb upstream 8495 true Scaffold0345: 147183-155677 Salix purpurea
SapurV1A.0345s0230 1.0kb upstream 1.0kb upstream 1000 false Scaffold0345: 147183-148182 Salix purpurea
SapurV1A.0345s0230 1.0kb downstream 1.0kb downstream 8495 true Scaffold0345: 148183-156677 Salix purpurea
SapurV1A.0345s0230 1.0kb downstream 1.0kb downstream 1000 false Scaffold0345: 155678-156677 Salix purpurea
SapurV1A.0345s0230 2.0kb upstream 2.0kb upstream 9495 true Scaffold0345: 146183-155677 Salix purpurea
SapurV1A.0345s0230 2.0kb upstream 2.0kb upstream 2000 false Scaffold0345: 146183-148182 Salix purpurea
SapurV1A.0345s0230 2.0kb downstream 2.0kb downstream 9495 true Scaffold0345: 148183-157677 Salix purpurea
SapurV1A.0345s0230 2.0kb downstream 2.0kb downstream 2000 false Scaffold0345: 155678-157677 Salix purpurea
SapurV1A.0345s0230 5.0kb upstream 5.0kb upstream 12495 true Scaffold0345: 143183-155677 Salix purpurea
SapurV1A.0345s0230 5.0kb upstream 5.0kb upstream 5000 false Scaffold0345: 143183-148182 Salix purpurea
SapurV1A.0345s0230 5.0kb downstream 5.0kb downstream 12495 true Scaffold0345: 148183-160677 Salix purpurea
SapurV1A.0345s0230 5.0kb downstream 5.0kb downstream 5000 false Scaffold0345: 155678-160677 Salix purpurea
SapurV1A.0345s0230 10.0kb upstream 10.0kb upstream 17495 true Scaffold0345: 138183-155677 Salix purpurea
SapurV1A.0345s0230 10.0kb upstream 10.0kb upstream 10000 false Scaffold0345: 138183-148182 Salix purpurea
SapurV1A.0345s0230 10.0kb downstream 10.0kb downstream 17495 true Scaffold0345: 148183-165677 Salix purpurea
SapurV1A.0345s0230 10.0kb downstream 10.0kb downstream 10000 false Scaffold0345: 155678-165677 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451476 5262 Malpighiales View MSA
124240765 5268 Malvidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain