Gene : SapurV1A.0160s0130 S. purpurea v1.0

Defline:  (1 of 1) K08775 - breast cancer 2 susceptibility protein (BRCA2, FANCD1) Genomic Order:  13
Name:  ? SapurV1A.0160s0130 Secondary Identifier:  ? PAC:31443940

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0160s0130 0.5kb upstream 0.5kb upstream 7718 true Scaffold0160: 208375-216092 Salix purpurea
SapurV1A.0160s0130 0.5kb upstream 0.5kb upstream 500 false Scaffold0160: 215593-216092 Salix purpurea
SapurV1A.0160s0130 0.5kb downstream 0.5kb downstream 7718 true Scaffold0160: 207875-215592 Salix purpurea
SapurV1A.0160s0130 0.5kb downstream 0.5kb downstream 500 false Scaffold0160: 207875-208374 Salix purpurea
SapurV1A.0160s0130 1.0kb upstream 1.0kb upstream 8218 true Scaffold0160: 208375-216592 Salix purpurea
SapurV1A.0160s0130 1.0kb upstream 1.0kb upstream 1000 false Scaffold0160: 215593-216592 Salix purpurea
SapurV1A.0160s0130 1.0kb downstream 1.0kb downstream 8218 true Scaffold0160: 207375-215592 Salix purpurea
SapurV1A.0160s0130 1.0kb downstream 1.0kb downstream 1000 false Scaffold0160: 207375-208374 Salix purpurea
SapurV1A.0160s0130 2.0kb upstream 2.0kb upstream 9218 true Scaffold0160: 208375-217592 Salix purpurea
SapurV1A.0160s0130 2.0kb upstream 2.0kb upstream 2000 false Scaffold0160: 215593-217592 Salix purpurea
SapurV1A.0160s0130 2.0kb downstream 2.0kb downstream 9218 true Scaffold0160: 206375-215592 Salix purpurea
SapurV1A.0160s0130 2.0kb downstream 2.0kb downstream 2000 false Scaffold0160: 206375-208374 Salix purpurea
SapurV1A.0160s0130 5.0kb upstream 5.0kb upstream 12218 true Scaffold0160: 208375-220592 Salix purpurea
SapurV1A.0160s0130 5.0kb upstream 5.0kb upstream 5000 false Scaffold0160: 215593-220592 Salix purpurea
SapurV1A.0160s0130 5.0kb downstream 5.0kb downstream 12218 true Scaffold0160: 203375-215592 Salix purpurea
SapurV1A.0160s0130 5.0kb downstream 5.0kb downstream 5000 false Scaffold0160: 203375-208374 Salix purpurea
SapurV1A.0160s0130 10.0kb upstream 10.0kb upstream 17218 true Scaffold0160: 208375-225592 Salix purpurea
SapurV1A.0160s0130 10.0kb upstream 10.0kb upstream 10000 false Scaffold0160: 215593-225592 Salix purpurea
SapurV1A.0160s0130 10.0kb downstream 10.0kb downstream 17218 true Scaffold0160: 198375-215592 Salix purpurea
SapurV1A.0160s0130 10.0kb downstream 10.0kb downstream 10000 false Scaffold0160: 198375-208374 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450466 5262 Malpighiales View MSA
124247927 5268 Malvidae View MSA
124050402 5270 Rosid View MSA
123749189 5271 Pentapetalae View MSA
122786519 5272 Eudicot View MSA
122044461 5273 Angiosperm View MSA
121310297 5274 Embryophyte View MSA
123425131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain