Gene : SapurV1A.0448s0100 S. purpurea v1.0
Defline:  (1 of 4) PTHR15141//PTHR15141:SF52 - TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 // BAH AND TFIIS DOMAIN-CONTAINING PROTEIN Genomic Order:  10
Name:  ? SapurV1A.0448s0100 Secondary Identifier:  ? PAC:31402244
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0448s0100 0.5kb upstream 0.5kb upstream 10021 true Scaffold0448: 194318-204338 Salix purpurea
SapurV1A.0448s0100 0.5kb upstream 0.5kb upstream 500 false Scaffold0448: 194318-194817 Salix purpurea
SapurV1A.0448s0100 0.5kb downstream 0.5kb downstream 10021 true Scaffold0448: 194818-204838 Salix purpurea
SapurV1A.0448s0100 0.5kb downstream 0.5kb downstream 500 false Scaffold0448: 204339-204838 Salix purpurea
SapurV1A.0448s0100 1.0kb upstream 1.0kb upstream 10521 true Scaffold0448: 193818-204338 Salix purpurea
SapurV1A.0448s0100 1.0kb upstream 1.0kb upstream 1000 false Scaffold0448: 193818-194817 Salix purpurea
SapurV1A.0448s0100 1.0kb downstream 1.0kb downstream 10521 true Scaffold0448: 194818-205338 Salix purpurea
SapurV1A.0448s0100 1.0kb downstream 1.0kb downstream 1000 false Scaffold0448: 204339-205338 Salix purpurea
SapurV1A.0448s0100 2.0kb upstream 2.0kb upstream 11521 true Scaffold0448: 192818-204338 Salix purpurea
SapurV1A.0448s0100 2.0kb upstream 2.0kb upstream 2000 false Scaffold0448: 192818-194817 Salix purpurea
SapurV1A.0448s0100 2.0kb downstream 2.0kb downstream 11521 true Scaffold0448: 194818-206338 Salix purpurea
SapurV1A.0448s0100 2.0kb downstream 2.0kb downstream 2000 false Scaffold0448: 204339-206338 Salix purpurea
SapurV1A.0448s0100 5.0kb upstream 5.0kb upstream 14521 true Scaffold0448: 189818-204338 Salix purpurea
SapurV1A.0448s0100 5.0kb upstream 5.0kb upstream 5000 false Scaffold0448: 189818-194817 Salix purpurea
SapurV1A.0448s0100 5.0kb downstream 5.0kb downstream 14521 true Scaffold0448: 194818-209338 Salix purpurea
SapurV1A.0448s0100 5.0kb downstream 5.0kb downstream 5000 false Scaffold0448: 204339-209338 Salix purpurea
SapurV1A.0448s0100 10.0kb upstream 10.0kb upstream 19521 true Scaffold0448: 184818-204338 Salix purpurea
SapurV1A.0448s0100 10.0kb upstream 10.0kb upstream 10000 false Scaffold0448: 184818-194817 Salix purpurea
SapurV1A.0448s0100 10.0kb downstream 10.0kb downstream 19521 true Scaffold0448: 194818-214338 Salix purpurea
SapurV1A.0448s0100 10.0kb downstream 10.0kb downstream 10000 false Scaffold0448: 204339-214338 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122426073 5262 Malpighiales View MSA
124250789 5268 Malvidae View MSA
124070029 5270 Rosid View MSA
123751253 5271 Pentapetalae View MSA
122792090 5272 Eudicot View MSA
122044388 5273 Angiosperm View MSA
121350650 5274 Embryophyte View MSA
123381837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain