Gene : SapurV1A.1157s0010 S. purpurea v1.0

Defline:  (1 of 4) PTHR11850//PTHR11850:SF101 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS // SUBFAMILY NOT NAMED Genomic Order:  1
Name:  ? SapurV1A.1157s0010 Secondary Identifier:  ? PAC:31455465

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1157s0010 0.5kb upstream 0.5kb upstream 10450 true Scaffold1157: 8475-18924 Salix purpurea
SapurV1A.1157s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1157: 8475-8974 Salix purpurea
SapurV1A.1157s0010 0.5kb downstream 0.5kb downstream 10450 true Scaffold1157: 8975-19424 Salix purpurea
SapurV1A.1157s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1157: 18925-19424 Salix purpurea
SapurV1A.1157s0010 1.0kb upstream 1.0kb upstream 10950 true Scaffold1157: 7975-18924 Salix purpurea
SapurV1A.1157s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1157: 7975-8974 Salix purpurea
SapurV1A.1157s0010 1.0kb downstream 1.0kb downstream 10950 true Scaffold1157: 8975-19924 Salix purpurea
SapurV1A.1157s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1157: 18925-19924 Salix purpurea
SapurV1A.1157s0010 2.0kb upstream 2.0kb upstream 11950 true Scaffold1157: 6975-18924 Salix purpurea
SapurV1A.1157s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1157: 6975-8974 Salix purpurea
SapurV1A.1157s0010 2.0kb downstream 2.0kb downstream 11950 true Scaffold1157: 8975-20924 Salix purpurea
SapurV1A.1157s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold1157: 18925-20924 Salix purpurea
SapurV1A.1157s0010 5.0kb upstream 5.0kb upstream 14950 true Scaffold1157: 3975-18924 Salix purpurea
SapurV1A.1157s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1157: 3975-8974 Salix purpurea
SapurV1A.1157s0010 5.0kb downstream 5.0kb downstream 14950 true Scaffold1157: 8975-23924 Salix purpurea
SapurV1A.1157s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold1157: 18925-23924 Salix purpurea
SapurV1A.1157s0010 10.0kb upstream 10.0kb upstream 18924 true Scaffold1157: 1-18924 Salix purpurea
SapurV1A.1157s0010 10.0kb upstream 10.0kb upstream 8974 false Scaffold1157: 1-8974 Salix purpurea
SapurV1A.1157s0010 10.0kb downstream 10.0kb downstream 19950 true Scaffold1157: 8975-28924 Salix purpurea
SapurV1A.1157s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold1157: 18925-28924 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460872 5262 Malpighiales View MSA
124246446 5268 Malvidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain