Gene : SapurV1A.0879s0030 S. purpurea v1.0
Defline:  (1 of 6) K10525 - allene oxide cyclase (AOC) Genomic Order:  3
Name:  ? SapurV1A.0879s0030 Secondary Identifier:  ? PAC:31443234
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Spurpurea PWY-735 Salix purpurea pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0879s0030 0.5kb upstream 0.5kb upstream 2560 true Scaffold0879: 28896-31455 Salix purpurea
SapurV1A.0879s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold0879: 28896-29395 Salix purpurea
SapurV1A.0879s0030 0.5kb downstream 0.5kb downstream 2560 true Scaffold0879: 29396-31955 Salix purpurea
SapurV1A.0879s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold0879: 31456-31955 Salix purpurea
SapurV1A.0879s0030 1.0kb upstream 1.0kb upstream 3060 true Scaffold0879: 28396-31455 Salix purpurea
SapurV1A.0879s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold0879: 28396-29395 Salix purpurea
SapurV1A.0879s0030 1.0kb downstream 1.0kb downstream 3060 true Scaffold0879: 29396-32455 Salix purpurea
SapurV1A.0879s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold0879: 31456-32455 Salix purpurea
SapurV1A.0879s0030 2.0kb upstream 2.0kb upstream 4060 true Scaffold0879: 27396-31455 Salix purpurea
SapurV1A.0879s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold0879: 27396-29395 Salix purpurea
SapurV1A.0879s0030 2.0kb downstream 2.0kb downstream 4060 true Scaffold0879: 29396-33455 Salix purpurea
SapurV1A.0879s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold0879: 31456-33455 Salix purpurea
SapurV1A.0879s0030 5.0kb upstream 5.0kb upstream 7060 true Scaffold0879: 24396-31455 Salix purpurea
SapurV1A.0879s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold0879: 24396-29395 Salix purpurea
SapurV1A.0879s0030 5.0kb downstream 5.0kb downstream 7060 true Scaffold0879: 29396-36455 Salix purpurea
SapurV1A.0879s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold0879: 31456-36455 Salix purpurea
SapurV1A.0879s0030 10.0kb upstream 10.0kb upstream 12060 true Scaffold0879: 19396-31455 Salix purpurea
SapurV1A.0879s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold0879: 19396-29395 Salix purpurea
SapurV1A.0879s0030 10.0kb downstream 10.0kb downstream 12060 true Scaffold0879: 29396-41455 Salix purpurea
SapurV1A.0879s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold0879: 31456-41455 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454646 5262 Malpighiales View MSA
124252758 5268 Malvidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain