Gene : SapurV1A.0870s0220 S. purpurea v1.0

Defline:  (1 of 3) K02738 - 20S proteasome subunit beta 1 (PSMB6) Genomic Order:  22
Name:  ? SapurV1A.0870s0220 Secondary Identifier:  ? PAC:31450402

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.0870s0220 0.5kb upstream 0.5kb upstream 3280 true Scaffold0870: 121830-125109 Salix purpurea
SapurV1A.0870s0220 0.5kb upstream 0.5kb upstream 500 false Scaffold0870: 121830-122329 Salix purpurea
SapurV1A.0870s0220 0.5kb downstream 0.5kb downstream 3280 true Scaffold0870: 122330-125609 Salix purpurea
SapurV1A.0870s0220 0.5kb downstream 0.5kb downstream 500 false Scaffold0870: 125110-125609 Salix purpurea
SapurV1A.0870s0220 1.0kb upstream 1.0kb upstream 3780 true Scaffold0870: 121330-125109 Salix purpurea
SapurV1A.0870s0220 1.0kb upstream 1.0kb upstream 1000 false Scaffold0870: 121330-122329 Salix purpurea
SapurV1A.0870s0220 1.0kb downstream 1.0kb downstream 3780 true Scaffold0870: 122330-126109 Salix purpurea
SapurV1A.0870s0220 1.0kb downstream 1.0kb downstream 1000 false Scaffold0870: 125110-126109 Salix purpurea
SapurV1A.0870s0220 2.0kb upstream 2.0kb upstream 4780 true Scaffold0870: 120330-125109 Salix purpurea
SapurV1A.0870s0220 2.0kb upstream 2.0kb upstream 2000 false Scaffold0870: 120330-122329 Salix purpurea
SapurV1A.0870s0220 2.0kb downstream 2.0kb downstream 4780 true Scaffold0870: 122330-127109 Salix purpurea
SapurV1A.0870s0220 2.0kb downstream 2.0kb downstream 2000 false Scaffold0870: 125110-127109 Salix purpurea
SapurV1A.0870s0220 5.0kb upstream 5.0kb upstream 7780 true Scaffold0870: 117330-125109 Salix purpurea
SapurV1A.0870s0220 5.0kb upstream 5.0kb upstream 5000 false Scaffold0870: 117330-122329 Salix purpurea
SapurV1A.0870s0220 5.0kb downstream 5.0kb downstream 7780 true Scaffold0870: 122330-130109 Salix purpurea
SapurV1A.0870s0220 5.0kb downstream 5.0kb downstream 5000 false Scaffold0870: 125110-130109 Salix purpurea
SapurV1A.0870s0220 10.0kb upstream 10.0kb upstream 12780 true Scaffold0870: 112330-125109 Salix purpurea
SapurV1A.0870s0220 10.0kb upstream 10.0kb upstream 10000 false Scaffold0870: 112330-122329 Salix purpurea
SapurV1A.0870s0220 10.0kb downstream 10.0kb downstream 8638 true Scaffold0870: 122330-130967 Salix purpurea
SapurV1A.0870s0220 10.0kb downstream 10.0kb downstream 5858 false Scaffold0870: 125110-130967 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453824 5262 Malpighiales View MSA
124242459 5268 Malvidae View MSA
124072118 5270 Rosid View MSA
123739837 5271 Pentapetalae View MSA
122787112 5272 Eudicot View MSA
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain