Gene : SapurV1A.1701s0040 S. purpurea v1.0

Defline:  (1 of 2) PTHR12585//PTHR12585:SF26 - SCC1 / RAD21 FAMILY MEMBER // SISTER CHROMATID COHESION 1 PROTEIN 1 Genomic Order:  4
Name:  ? SapurV1A.1701s0040 Secondary Identifier:  ? PAC:31422999

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1701s0040 0.5kb upstream 0.5kb upstream 3169 true Scaffold1701: 24993-28161 Salix purpurea
SapurV1A.1701s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold1701: 24993-25492 Salix purpurea
SapurV1A.1701s0040 0.5kb downstream 0.5kb downstream 3169 true Scaffold1701: 25493-28661 Salix purpurea
SapurV1A.1701s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold1701: 28162-28661 Salix purpurea
SapurV1A.1701s0040 1.0kb upstream 1.0kb upstream 3669 true Scaffold1701: 24493-28161 Salix purpurea
SapurV1A.1701s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold1701: 24493-25492 Salix purpurea
SapurV1A.1701s0040 1.0kb downstream 1.0kb downstream 3669 true Scaffold1701: 25493-29161 Salix purpurea
SapurV1A.1701s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold1701: 28162-29161 Salix purpurea
SapurV1A.1701s0040 2.0kb upstream 2.0kb upstream 4669 true Scaffold1701: 23493-28161 Salix purpurea
SapurV1A.1701s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold1701: 23493-25492 Salix purpurea
SapurV1A.1701s0040 2.0kb downstream 2.0kb downstream 4669 true Scaffold1701: 25493-30161 Salix purpurea
SapurV1A.1701s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold1701: 28162-30161 Salix purpurea
SapurV1A.1701s0040 5.0kb upstream 5.0kb upstream 7669 true Scaffold1701: 20493-28161 Salix purpurea
SapurV1A.1701s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold1701: 20493-25492 Salix purpurea
SapurV1A.1701s0040 5.0kb downstream 5.0kb downstream 7669 true Scaffold1701: 25493-33161 Salix purpurea
SapurV1A.1701s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold1701: 28162-33161 Salix purpurea
SapurV1A.1701s0040 10.0kb upstream 10.0kb upstream 12669 true Scaffold1701: 15493-28161 Salix purpurea
SapurV1A.1701s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold1701: 15493-25492 Salix purpurea
SapurV1A.1701s0040 10.0kb downstream 10.0kb downstream 12669 true Scaffold1701: 25493-38161 Salix purpurea
SapurV1A.1701s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold1701: 28162-38161 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122406938 5262 Malpighiales Singleton cluster - no MSA
124202455 5268 Malvidae Singleton cluster - no MSA
124037507 5270 Rosid View MSA
123610350 5271 Pentapetalae View MSA
122644972 5272 Eudicot View MSA
122042862 5273 Angiosperm View MSA
121347788 5274 Embryophyte View MSA
123426470 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain