Gene : SapurV1A.1657s0050 S. purpurea v1.0

Defline:  (1 of 6) PF06273 - Plant specific eukaryotic initiation factor 4B (eIF-4B) Genomic Order:  5
Name:  ? SapurV1A.1657s0050 Secondary Identifier:  ? PAC:31449401

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1657s0050 0.5kb upstream 0.5kb upstream 8009 true Scaffold1657: 19446-27454 Salix purpurea
SapurV1A.1657s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold1657: 19446-19945 Salix purpurea
SapurV1A.1657s0050 0.5kb downstream 0.5kb downstream 8009 true Scaffold1657: 19946-27954 Salix purpurea
SapurV1A.1657s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold1657: 27455-27954 Salix purpurea
SapurV1A.1657s0050 1.0kb upstream 1.0kb upstream 8509 true Scaffold1657: 18946-27454 Salix purpurea
SapurV1A.1657s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold1657: 18946-19945 Salix purpurea
SapurV1A.1657s0050 1.0kb downstream 1.0kb downstream 8509 true Scaffold1657: 19946-28454 Salix purpurea
SapurV1A.1657s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold1657: 27455-28454 Salix purpurea
SapurV1A.1657s0050 2.0kb upstream 2.0kb upstream 9509 true Scaffold1657: 17946-27454 Salix purpurea
SapurV1A.1657s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold1657: 17946-19945 Salix purpurea
SapurV1A.1657s0050 2.0kb downstream 2.0kb downstream 9509 true Scaffold1657: 19946-29454 Salix purpurea
SapurV1A.1657s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold1657: 27455-29454 Salix purpurea
SapurV1A.1657s0050 5.0kb upstream 5.0kb upstream 12509 true Scaffold1657: 14946-27454 Salix purpurea
SapurV1A.1657s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold1657: 14946-19945 Salix purpurea
SapurV1A.1657s0050 5.0kb downstream 5.0kb downstream 12509 true Scaffold1657: 19946-32454 Salix purpurea
SapurV1A.1657s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold1657: 27455-32454 Salix purpurea
SapurV1A.1657s0050 10.0kb upstream 10.0kb upstream 17509 true Scaffold1657: 9946-27454 Salix purpurea
SapurV1A.1657s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold1657: 9946-19945 Salix purpurea
SapurV1A.1657s0050 10.0kb downstream 10.0kb downstream 17509 true Scaffold1657: 19946-37454 Salix purpurea
SapurV1A.1657s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold1657: 27455-37454 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579099 5273 Angiosperm View MSA
122464354 5262 Malpighiales View MSA
124236782 5268 Malvidae View MSA
123951904 5270 Rosid View MSA
123529893 5271 Pentapetalae View MSA
122564875 5272 Eudicot View MSA
120851569 5274 Embryophyte View MSA
122892754 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain