Gene : SapurV1A.1502s0020 S. purpurea v1.0
Defline:  (1 of 7) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  2
Name:  ? SapurV1A.1502s0020 Secondary Identifier:  ? PAC:31447520
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1502s0020 0.5kb upstream 0.5kb upstream 5309 true Scaffold1502: 40008-45316 Salix purpurea
SapurV1A.1502s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold1502: 44817-45316 Salix purpurea
SapurV1A.1502s0020 0.5kb downstream 0.5kb downstream 5309 true Scaffold1502: 39508-44816 Salix purpurea
SapurV1A.1502s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold1502: 39508-40007 Salix purpurea
SapurV1A.1502s0020 1.0kb upstream 1.0kb upstream 5809 true Scaffold1502: 40008-45816 Salix purpurea
SapurV1A.1502s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold1502: 44817-45816 Salix purpurea
SapurV1A.1502s0020 1.0kb downstream 1.0kb downstream 5809 true Scaffold1502: 39008-44816 Salix purpurea
SapurV1A.1502s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold1502: 39008-40007 Salix purpurea
SapurV1A.1502s0020 2.0kb upstream 2.0kb upstream 6809 true Scaffold1502: 40008-46816 Salix purpurea
SapurV1A.1502s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold1502: 44817-46816 Salix purpurea
SapurV1A.1502s0020 2.0kb downstream 2.0kb downstream 6809 true Scaffold1502: 38008-44816 Salix purpurea
SapurV1A.1502s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold1502: 38008-40007 Salix purpurea
SapurV1A.1502s0020 5.0kb upstream 5.0kb upstream 9809 true Scaffold1502: 40008-49816 Salix purpurea
SapurV1A.1502s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold1502: 44817-49816 Salix purpurea
SapurV1A.1502s0020 5.0kb downstream 5.0kb downstream 9809 true Scaffold1502: 35008-44816 Salix purpurea
SapurV1A.1502s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold1502: 35008-40007 Salix purpurea
SapurV1A.1502s0020 10.0kb upstream 10.0kb upstream 14809 true Scaffold1502: 40008-54816 Salix purpurea
SapurV1A.1502s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold1502: 44817-54816 Salix purpurea
SapurV1A.1502s0020 10.0kb downstream 10.0kb downstream 14809 true Scaffold1502: 30008-44816 Salix purpurea
SapurV1A.1502s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold1502: 30008-40007 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122463314 5262 Malpighiales View MSA
124243275 5268 Malvidae View MSA
124060728 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain