Gene : SapurV1A.1526s0010 S. purpurea v1.0

Defline:  (1 of 3) K02906 - large subunit ribosomal protein L3 (RP-L3, MRPL3, rplC) Genomic Order:  1
Name:  ? SapurV1A.1526s0010 Secondary Identifier:  ? PAC:31456264

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1526s0010 0.5kb upstream 0.5kb upstream 4005 true Scaffold1526: 1078-5082 Salix purpurea
SapurV1A.1526s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold1526: 4583-5082 Salix purpurea
SapurV1A.1526s0010 0.5kb downstream 0.5kb downstream 4005 true Scaffold1526: 578-4582 Salix purpurea
SapurV1A.1526s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold1526: 578-1077 Salix purpurea
SapurV1A.1526s0010 1.0kb upstream 1.0kb upstream 4505 true Scaffold1526: 1078-5582 Salix purpurea
SapurV1A.1526s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold1526: 4583-5582 Salix purpurea
SapurV1A.1526s0010 1.0kb downstream 1.0kb downstream 4505 true Scaffold1526: 78-4582 Salix purpurea
SapurV1A.1526s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold1526: 78-1077 Salix purpurea
SapurV1A.1526s0010 2.0kb upstream 2.0kb upstream 5505 true Scaffold1526: 1078-6582 Salix purpurea
SapurV1A.1526s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold1526: 4583-6582 Salix purpurea
SapurV1A.1526s0010 2.0kb downstream 2.0kb downstream 4582 true Scaffold1526: 1-4582 Salix purpurea
SapurV1A.1526s0010 2.0kb downstream 2.0kb downstream 1077 false Scaffold1526: 1-1077 Salix purpurea
SapurV1A.1526s0010 5.0kb upstream 5.0kb upstream 8505 true Scaffold1526: 1078-9582 Salix purpurea
SapurV1A.1526s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold1526: 4583-9582 Salix purpurea
SapurV1A.1526s0010 5.0kb downstream 5.0kb downstream 4582 true Scaffold1526: 1-4582 Salix purpurea
SapurV1A.1526s0010 5.0kb downstream 5.0kb downstream 1077 false Scaffold1526: 1-1077 Salix purpurea
SapurV1A.1526s0010 10.0kb upstream 10.0kb upstream 13505 true Scaffold1526: 1078-14582 Salix purpurea
SapurV1A.1526s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold1526: 4583-14582 Salix purpurea
SapurV1A.1526s0010 10.0kb downstream 10.0kb downstream 4582 true Scaffold1526: 1-4582 Salix purpurea
SapurV1A.1526s0010 10.0kb downstream 10.0kb downstream 1077 false Scaffold1526: 1-1077 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454893 5262 Malpighiales View MSA
124240687 5268 Malvidae View MSA
124065748 5270 Rosid View MSA
123738744 5271 Pentapetalae View MSA
122789869 5272 Eudicot View MSA
122045324 5273 Angiosperm View MSA
121345388 5274 Embryophyte View MSA
123425117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain