Gene : SapurV1A.1456s0040 S. purpurea v1.0
Defline:  (1 of 2) K03086 - RNA polymerase primary sigma factor (SIG1, rpoD) Genomic Order:  4
Name:  ? SapurV1A.1456s0040 Secondary Identifier:  ? PAC:31449849
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.1456s0040 0.5kb upstream 0.5kb upstream 8306 true Scaffold1456: 54999-63304 Salix purpurea
SapurV1A.1456s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold1456: 54999-55498 Salix purpurea
SapurV1A.1456s0040 0.5kb downstream 0.5kb downstream 8306 true Scaffold1456: 55499-63804 Salix purpurea
SapurV1A.1456s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold1456: 63305-63804 Salix purpurea
SapurV1A.1456s0040 1.0kb upstream 1.0kb upstream 8806 true Scaffold1456: 54499-63304 Salix purpurea
SapurV1A.1456s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold1456: 54499-55498 Salix purpurea
SapurV1A.1456s0040 1.0kb downstream 1.0kb downstream 8806 true Scaffold1456: 55499-64304 Salix purpurea
SapurV1A.1456s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold1456: 63305-64304 Salix purpurea
SapurV1A.1456s0040 2.0kb upstream 2.0kb upstream 9806 true Scaffold1456: 53499-63304 Salix purpurea
SapurV1A.1456s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold1456: 53499-55498 Salix purpurea
SapurV1A.1456s0040 2.0kb downstream 2.0kb downstream 9806 true Scaffold1456: 55499-65304 Salix purpurea
SapurV1A.1456s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold1456: 63305-65304 Salix purpurea
SapurV1A.1456s0040 5.0kb upstream 5.0kb upstream 12806 true Scaffold1456: 50499-63304 Salix purpurea
SapurV1A.1456s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold1456: 50499-55498 Salix purpurea
SapurV1A.1456s0040 5.0kb downstream 5.0kb downstream 12806 true Scaffold1456: 55499-68304 Salix purpurea
SapurV1A.1456s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold1456: 63305-68304 Salix purpurea
SapurV1A.1456s0040 10.0kb upstream 10.0kb upstream 17806 true Scaffold1456: 45499-63304 Salix purpurea
SapurV1A.1456s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold1456: 45499-55498 Salix purpurea
SapurV1A.1456s0040 10.0kb downstream 10.0kb downstream 13928 true Scaffold1456: 55499-69426 Salix purpurea
SapurV1A.1456s0040 10.0kb downstream 10.0kb downstream 6122 false Scaffold1456: 63305-69426 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448331 5262 Malpighiales View MSA
124240953 5268 Malvidae View MSA
124062387 5270 Rosid View MSA
123751324 5271 Pentapetalae View MSA
122790966 5272 Eudicot View MSA
122043866 5273 Angiosperm View MSA
121344219 5274 Embryophyte View MSA
123380005 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain